RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TAF12Q16514 161 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 CRY1Q16526 586 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 DUOXA1Q1HG43 343 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 CC2D1AQ6P1N0 951 aaPredicted RBP10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 SFTPA1Q8IWL2 248 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 SCUBE3Q8IX30 993 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 THEM5Q8N1Q8 247 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 CPA6Q8N4T0 437 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 MAB21L3Q8N8X9 362 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 RASSF8Q8NHQ8 419 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 SPPL2BQ8TCT7 592 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 C2orf15Q8WU43 125 aaKnown RBP10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 CCSER1Q9C0I3 900 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 TMLHEQ9NVH6 421 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 DNAAF2Q9NVR5 837 aaKnown RBP10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 DPP3Q9NY33 737 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 MMP17Q9ULZ9 603 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 APOBEC2Q9Y235 224 aaKnown RBP10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 WNT6Q9Y6F9 365 aa10.14□□□□□ -0.79
SMARCE1-210ENST00000481231 TSC2P49815 1807 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 FAM149AA5PLN7 773 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 TRABD2BA6NFA1 517 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 K7EQS6 105 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 GJB3O75712 270 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 BMP15O95972 392 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 F11P03951 625 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 ADSSP30520 456 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 ABCD1P33897 745 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 LONP1P36776 959 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 GPR15P49685 360 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 NLRP12P59046 1061 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 MAP7D1Q3KQU3 841 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 TXNDC8Q6A555 127 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 SLFN12LQ6IEE8 588 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 CRELD2Q6UXH1 353 aaPredicted RBP10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 SFR1Q86XK3 245 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 STKLD1Q8NE28 680 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 CEP76Q8TAP6 659 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 WHAMMQ8TF30 809 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 HMGB4Q8WW32 186 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 LARP4BQ92615 738 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 ST6GALNAC4Q9H4F1 302 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 PRORYQ9H606 182 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 ZDHHC4Q9NPG8 344 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 TDP1Q9NUW8 608 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 BCCIPQ9P287 314 aaKnown RBP eCLIP10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 ZMYM5Q9UJ78 669 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 PCDHB5Q9Y5E4 795 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 MYH11P35749 1972 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 MYO16Q9Y6X6 1858 aa10.13□□□□□ -0.79
SMARCE1-210ENST00000481231 SCN1AP35498 2009 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 KPNA7A9QM74 516 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 PPP1R37O75864 691 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 ALDH1A2O94788 518 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 IL18RAPO95256 599 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 DDX6P26196 483 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 HOXD12P35452 270 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 DDIT3P35638 169 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 WNT7BP56706 349 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 TFAMQ00059 246 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 TSPY1Q01534 308 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 POU5F1Q01860 360 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 RPL6Q02878 288 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 MTF1Q14872 753 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 PDGFRLQ15198 375 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 SV2CQ496J9 727 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 SDHAF4Q5VUM1 108 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 LMBRD2Q68DH5 695 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 USP49Q70CQ1 688 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 TMPRSS7Q7RTY8 843 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 ZNF720Q7Z2F6 126 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 MON1AQ86VX9 555 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 DCP1BQ8IZD4 617 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 PDCL2Q8N4E4 241 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 ALLCQ8N6M5 410 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 KRI1Q8N9T8 703 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 ZSWIM2Q8NEG5 633 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 POMGNT1Q8WZA1 660 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 EXOC4Q96A65 974 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 FAM84AQ96KN4 292 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 ZNF560Q96MR9 790 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 FCRL3Q96P31 734 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 PI4K2AQ9BTU6 479 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 CLMPQ9H6B4 373 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 KIF9Q9HAQ2 790 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 SMC3Q9UQE7 1217 aa10.12□□□□□ -0.79
SMARCE1-210ENST00000481231 GOLGA8CPA6NN73 597 aa10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 SGK1O00141 431 aa10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 CBFA2T3O75081 653 aa10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 PRPF40AO75400 957 aaKnown RBP10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 TADA3O75528 432 aa10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 KLF8O95600 359 aaPredicted RBP10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 POLR2BP30876 1174 aaKnown RBP10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 PNPLA4P41247 253 aa10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 DPP6P42658 865 aa10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 CFHR1Q03591 330 aa10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 KCNA1Q09470 495 aa10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 MESP2Q0VG99 397 aa10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 SLC14A1Q13336 389 aa10.11□□□□□ -0.79
SMARCE1-210ENST00000481231 CAMK2BQ13554 666 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms