RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 CHFRQ96EP1 664 aa16.27■□□□□ 0.2
LIMS3-203ENST00000480744 SPATA17Q96L03 361 aa16.27■□□□□ 0.2
LIMS3-203ENST00000480744 P2RY13Q9BPV8 354 aa16.27■□□□□ 0.2
LIMS3-203ENST00000480744 DPEP3Q9H4B8 488 aa16.27■□□□□ 0.2
LIMS3-203ENST00000480744 ECT2Q9H8V3 914 aa16.27■□□□□ 0.2
LIMS3-203ENST00000480744 TRPM5Q9NZQ8 1165 aa16.27■□□□□ 0.2
LIMS3-203ENST00000480744 GCNT4Q9P109 453 aa16.27■□□□□ 0.2
LIMS3-203ENST00000480744 CGNQ9P2M7 1197 aaKnown RBP16.27■□□□□ 0.2
LIMS3-203ENST00000480744 CDV3Q9UKY7 258 aaKnown RBP16.27■□□□□ 0.2
LIMS3-203ENST00000480744 SLC8A2Q9UPR5 921 aa16.27■□□□□ 0.2
LIMS3-203ENST00000480744 SDK1Q7Z5N4 2213 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 A8MXQ7 604 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 PRR5-ARHGAP8B1AHC4 643 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 F8VP50 259 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 TRIM66O15016 1216 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 ATG13O75143 517 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 RNF40O75150 1001 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 TACC1O75410 805 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 ABL1P00519 1130 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 RETP07949 1114 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 PTPN1P18031 435 aaKnown RBP16.26■□□□□ 0.19
LIMS3-203ENST00000480744 GJA4P35212 333 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 CASP4P49662 377 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 GALK1P51570 392 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 ARHGAP8P85298 464 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 IFRD2Q12894 506 aaPredicted RBP16.26■□□□□ 0.19
LIMS3-203ENST00000480744 BIRC3Q13489 604 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 BMT2Q1RMZ1 405 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 ATL3Q6DD88 541 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 WDR5BQ86VZ2 330 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 ZNF516Q92618 1163 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 ATP2A3Q93084 1043 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 EXOC4Q96A65 974 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 FBRSL1Q9HCM7 1045 aaKnown RBP16.26■□□□□ 0.19
LIMS3-203ENST00000480744 EXOC1Q9NV70 894 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 NME7Q9Y5B8 376 aa16.26■□□□□ 0.19
LIMS3-203ENST00000480744 MYOFQ9NZM1 2061 aa16.25■□□□□ 0.19
LIMS3-203ENST00000480744 DRD1P21728 446 aa16.25■□□□□ 0.19
LIMS3-203ENST00000480744 SDHBP21912 280 aa16.25■□□□□ 0.19
LIMS3-203ENST00000480744 TGM1P22735 817 aa16.25■□□□□ 0.19
LIMS3-203ENST00000480744 PDE6CP51160 858 aa16.25■□□□□ 0.19
LIMS3-203ENST00000480744 PSMD2Q13200 908 aa16.25■□□□□ 0.19
LIMS3-203ENST00000480744 EML3Q32P44 896 aa16.25■□□□□ 0.19
LIMS3-203ENST00000480744 C12orf56Q8IXR9 622 aa16.25■□□□□ 0.19
LIMS3-203ENST00000480744 GOLGA5Q8TBA6 731 aa16.25■□□□□ 0.19
LIMS3-203ENST00000480744 SYAP1Q96A49 352 aaPredicted RBP16.25■□□□□ 0.19
LIMS3-203ENST00000480744 GZF1Q9H116 711 aaPredicted RBP16.25■□□□□ 0.19
LIMS3-203ENST00000480744 POLR3BQ9NW08 1133 aaPredicted RBP16.25■□□□□ 0.19
LIMS3-203ENST00000480744 EHD2Q9NZN4 543 aa16.25■□□□□ 0.19
LIMS3-203ENST00000480744 ARHGAP26Q9UNA1 814 aa16.25■□□□□ 0.19
LIMS3-203ENST00000480744 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.25■□□□□ 0.19
LIMS3-203ENST00000480744 CLDN5O00501 218 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 SLFN14P0C7P3 912 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 HOXA6P31267 233 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 CACNA2D1P54289 1103 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 NR1H3Q13133 447 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 ZNF699Q32M78 642 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 SCARA5Q6ZMJ2 495 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 FAM160A2Q8N612 972 aaPredicted RBP16.24■□□□□ 0.19
LIMS3-203ENST00000480744 PLEKHO2Q8TD55 490 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 CD101Q93033 1021 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 PAGE5Q96GU1 130 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 C8orf48Q96LL4 319 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 CEP295NLQ96MC4 621 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 ZNF518BQ9C0D4 1074 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 ELOVL4Q9GZR5 314 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 LINC00597Q9H2U6 94 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 SMYD3Q9H7B4 428 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 RCOR1Q9UKL0 485 aa16.24■□□□□ 0.19
LIMS3-203ENST00000480744 LRRIQ3A6PVS8 624 aaPredicted RBP16.23■□□□□ 0.19
LIMS3-203ENST00000480744 LEFTY2O00292 366 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 ACTN4O43707 911 aaKnown RBP16.23■□□□□ 0.19
LIMS3-203ENST00000480744 KLRC4O43908 158 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 NFATC1O95644 943 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 STAU1O95793 577 aaKnown RBP16.23■□□□□ 0.19
LIMS3-203ENST00000480744 FAM163BP0C2L3 166 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 CCDC192P0DO97 292 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 ATICP31939 592 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 RAP1GAPP47736 663 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 ATXN1P54253 815 aaKnown RBP16.23■□□□□ 0.19
LIMS3-203ENST00000480744 CDH8P55286 799 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 TAF10Q12962 218 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 STK4Q13043 487 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 KMT5BQ4FZB7 885 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 ZNF667Q5HYK9 610 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 TDRD10Q5VZ19 366 aaKnown RBP16.23■□□□□ 0.19
LIMS3-203ENST00000480744 B3GALNT2Q8NCR0 500 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 KIAA0895Q8NCT3 520 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 RPLP0P6Q8NHW5 317 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 ELMO3Q96BJ8 720 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 HHIPQ96QV1 700 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 MED10Q9BTT4 135 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 TTLL2Q9BWV7 592 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 B3GNT5Q9BYG0 378 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 XYLT2Q9H1B5 865 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 SEMA4GQ9NTN9 838 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 SMPD4Q9NXE4 827 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 DNAH14Q0VDD8 3507 aa16.23■□□□□ 0.19
LIMS3-203ENST00000480744 ATP8B3O60423 1300 aa16.22■□□□□ 0.19
LIMS3-203ENST00000480744 A0A1B0GVL5 298 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms