RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 MATKP42679 507 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 TNFRSF4P43489 277 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 EVCP57679 992 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 CXADRP78310 365 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 PPP2R3AQ06190 1150 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 STRN3Q13033 797 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 RESTQ13127 1097 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 DHCR24Q15392 516 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 SMAD1Q15797 465 aaKnown RBP12.02□□□□□ -0.49
CCDC18-208ENST00000479653 PCSK4Q6UW60 755 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 DHRS13Q6UX07 377 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 FILIP1Q7Z7B0 1213 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 ERMNQ8TAM6 284 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 FOXJ1Q92949 421 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 FAM212AQ96EL1 285 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 PHF12Q96QT6 1004 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 DNMT3LQ9UJW3 386 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 DSEQ9UL01 958 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCDC18-208ENST00000479653 RBM19Q9Y4C8 960 aaKnown RBP12.02□□□□□ -0.49
CCDC18-208ENST00000479653 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.02□□□□□ -0.49
CCDC18-208ENST00000479653 SNX14Q9Y5W7 946 aa12.02□□□□□ -0.49
CCDC18-208ENST00000479653 USP9XQ93008 2570 aaPredicted RBP12.02□□□□□ -0.49
CCDC18-208ENST00000479653 PCDH15Q96QU1 1955 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 GOLGA4Q13439 2230 aaKnown RBP12.01□□□□□ -0.49
CCDC18-208ENST00000479653 A0A1B0GTW7 788 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 TTC26A0AVF1 554 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 BTBD18B2RXH4 712 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 E9PAM4 449 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 LEFTY2O00292 366 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 CYB561D2O14569 222 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 SCAMP3O14828 347 aaKnown RBP12.01□□□□□ -0.49
CCDC18-208ENST00000479653 SLC16A4O15374 487 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 FLRT2O43155 660 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 DKK1O94907 266 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 WISP1O95388 367 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 CER1O95813 267 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 CYP11A1P05108 521 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 CLTAP09496 248 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 HOXB2P14652 356 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 RPA1P27694 616 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 KRT2P35908 639 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 TNFSF9P41273 254 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 RPL10AP62906 217 aaKnown RBP12.01□□□□□ -0.49
CCDC18-208ENST00000479653 ATP2C1P98194 919 aaPredicted RBP12.01□□□□□ -0.49
CCDC18-208ENST00000479653 SUZ12Q15022 739 aaKnown RBP12.01□□□□□ -0.49
CCDC18-208ENST00000479653 HLA-BQ31612 363 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 TRMT11Q7Z4G4 463 aaKnown RBP12.01□□□□□ -0.49
CCDC18-208ENST00000479653 C12orf40Q86WS4 652 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 ZNF513Q8N8E2 541 aaPredicted RBP12.01□□□□□ -0.49
CCDC18-208ENST00000479653 FSIP1Q8NA03 581 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 BAHD1Q8TBE0 780 aaPredicted RBP12.01□□□□□ -0.49
CCDC18-208ENST00000479653 BAP1Q92560 729 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 NXPE2Q96DL1 559 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 PYM1Q9BRP8 204 aaKnown RBP12.01□□□□□ -0.49
CCDC18-208ENST00000479653 GCNT4Q9P109 453 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 ARHGAP28Q9P2N2 729 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 ARHGAP26Q9UNA1 814 aa12.01□□□□□ -0.49
CCDC18-208ENST00000479653 FNDC3AQ9Y2H6 1198 aaKnown RBP12.01□□□□□ -0.49
CCDC18-208ENST00000479653 A0A0A0MRY4 1105 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 MEI4A8MW99 385 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 TNFSF14O43557 240 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
CCDC18-208ENST00000479653 JUPP14923 745 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 PAX3P23760 479 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 CYP2F1P24903 491 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 PSMA5P28066 241 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 RABEP1Q15276 862 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 SAFBQ15424 915 aaKnown RBP eCLIP12□□□□□ -0.49
CCDC18-208ENST00000479653 C6orf118Q5T5N4 469 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 C9orf57Q5W0N0 161 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 WSCD1Q658N2 575 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 IL27RAQ6UWB1 636 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 ZCCHC9Q8N567 271 aaKnown RBP12□□□□□ -0.49
CCDC18-208ENST00000479653 KCNB2Q92953 911 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 TMEM60Q9H2L4 133 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 BRMS1Q9HCU9 246 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 TMLHEQ9NVH6 421 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 BTBD3Q9Y2F9 522 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 MGAQ8IWI9 3026 aa12□□□□□ -0.49
CCDC18-208ENST00000479653 TNRC6BQ9UPQ9 1833 aaKnown RBP12□□□□□ -0.49
CCDC18-208ENST00000479653 ATMQ13315 3056 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 SFI1A8K8P3 1242 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.99□□□□□ -0.49
CCDC18-208ENST00000479653 B8ZZF3 427 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 ERVH48-1M5A8F1 160 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 WNT7AO00755 349 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 HIP1RO75146 1068 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 CDKL5O76039 1030 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 NOL4O94818 638 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 NFICP08651 508 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 ZNF883P0CG24 379 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 NDUFV2P19404 249 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 EIF2DP41214 584 aaKnown RBP11.99□□□□□ -0.49
CCDC18-208ENST00000479653 ZXDBP98169 803 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 TSPY1Q01534 308 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 MCL1Q07820 350 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 SRSF1Q07955 248 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC18-208ENST00000479653 MYO1EQ12965 1108 aa11.99□□□□□ -0.49
CCDC18-208ENST00000479653 TOB2Q14106 344 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms