RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CEP295NLQ96MC4 621 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 PNKPQ96T60 521 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 PKMYT1Q99640 499 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 TMEM74BQ9NUR3 256 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 EHD2Q9NZN4 543 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 PILRBQ9UKJ0 227 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 GTF3C4Q9UKN8 822 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 SLC6A14Q9UN76 642 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 WDFY3Q8IZQ1 3526 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 TCRBV21S2A2A0A5A6 115 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 FAM221BA6H8Z2 402 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 SGK1O00141 431 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 ITGB3P05106 788 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 HNRNPLP14866 589 aaKnown RBP eCLIP17.24■□□□□ 0.35
DDX56-210ENST00000479440 TIE1P35590 1138 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 MAGEA11P43364 429 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 LHX1P48742 406 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 TFAMQ00059 246 aaKnown RBP17.24■□□□□ 0.35
DDX56-210ENST00000479440 GFPT1Q06210 699 aaPredicted RBP17.24■□□□□ 0.35
DDX56-210ENST00000479440 DHX8Q14562 1220 aaKnown RBP17.24■□□□□ 0.35
DDX56-210ENST00000479440 GAB4Q2WGN9 574 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 SLC36A4Q6YBV0 504 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 FILIP1Q7Z7B0 1213 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 HVCN1Q96D96 273 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 FIZ1Q96SL8 496 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 ST6GALNAC4Q9H4F1 302 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 TRPM5Q9NZQ8 1165 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 MBD1Q9UIS9 605 aaPredicted RBP17.24■□□□□ 0.35
DDX56-210ENST00000479440 AGAP1Q9UPQ3 857 aa17.24■□□□□ 0.35
DDX56-210ENST00000479440 TISP43B9A030 160 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 KAT7O95251 611 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 ADH1CP00326 375 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 SERPINF2P08697 491 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 ITPKAP23677 461 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 POSTNQ15063 836 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 DHCR24Q15392 516 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 MAP7D1Q3KQU3 841 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 TRMT11Q7Z4G4 463 aaKnown RBP17.23■□□□□ 0.35
DDX56-210ENST00000479440 CHCHD4Q8N4Q1 142 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 TOP6BLQ8N6T0 577 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 C1orf127Q8N9H9 656 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 RASSF8Q8NHQ8 419 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 CACTINQ8WUQ7 758 aaKnown RBP17.23■□□□□ 0.35
DDX56-210ENST00000479440 SPATA17Q96L03 361 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 ARHGEF4Q9NR80 690 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 ITGA11Q9UKX5 1188 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 KIF3AQ9Y496 699 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 PKD1L2Q7Z442 2459 aa17.23■□□□□ 0.35
DDX56-210ENST00000479440 PLXND1Q9Y4D7 1925 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
DDX56-210ENST00000479440 SEC24BO95487 1268 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 ANXA13P27216 316 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 UBA7P41226 1012 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 GRIA2P42262 883 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 PPP3CCP48454 512 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 SLC7A9P82251 487 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 RPL6Q02878 288 aaKnown RBP17.22■□□□□ 0.35
DDX56-210ENST00000479440 MAPRE1Q15691 268 aaKnown RBP17.22■□□□□ 0.35
DDX56-210ENST00000479440 MCTP1Q6DN14 999 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 VSTM1Q6UX27 236 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 CRELD2Q6UXH1 353 aaPredicted RBP17.22■□□□□ 0.35
DDX56-210ENST00000479440 RAB44Q7Z6P3 723 aaPredicted RBP17.22■□□□□ 0.35
DDX56-210ENST00000479440 DDX42Q86XP3 938 aaKnown RBP eCLIP17.22■□□□□ 0.35
DDX56-210ENST00000479440 BRSK2Q8IWQ3 736 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 MINDY1Q8N5J2 469 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 GDAP2Q9NXN4 497 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 GPSM3Q9Y4H4 160 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 SNX9Q9Y5X1 595 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 CPQQ9Y646 472 aa17.22■□□□□ 0.35
DDX56-210ENST00000479440 ABCA7Q8IZY2 2146 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 ZFYVE26Q68DK2 2539 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 ANTXRLA6NF34 631 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 ADH5P11766 374 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 KIR2DL1P43626 348 aaPredicted RBP17.21■□□□□ 0.35
DDX56-210ENST00000479440 ZXDBP98169 803 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 KDSRQ06136 332 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 MCM6Q14566 821 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 CCDC142Q17RM4 750 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 PREPLQ4J6C6 727 aaPredicted RBP17.21■□□□□ 0.35
DDX56-210ENST00000479440 DENND5BQ6ZUT9 1274 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 OSTM1Q86WC4 334 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 FRMD1Q8N878 549 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 LRRC15Q8TF66 581 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 RAD54LQ92698 747 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 SYT15Q9BQS2 421 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 FAM213AQ9BRX8 229 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 CAPN10Q9HC96 672 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 FSCN3Q9NQT6 498 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 BLOC1S4Q9NUP1 217 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 RBAKQ9NYW8 714 aaPredicted RBP17.21■□□□□ 0.35
DDX56-210ENST00000479440 MAGEC2Q9UBF1 373 aaPredicted RBP17.21■□□□□ 0.35
DDX56-210ENST00000479440 EXOC7Q9UPT5 735 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 R3HCC1Q9Y3T6 440 aaKnown RBP17.21■□□□□ 0.35
DDX56-210ENST00000479440 PTPRDP23468 1912 aa17.21■□□□□ 0.35
DDX56-210ENST00000479440 GABRDO14764 452 aa17.2■□□□□ 0.34
DDX56-210ENST00000479440 TRIM66O15016 1216 aa17.2■□□□□ 0.34
DDX56-210ENST00000479440 SYPP08247 313 aa17.2■□□□□ 0.34
DDX56-210ENST00000479440 KRT19P08727 400 aa17.2■□□□□ 0.34
DDX56-210ENST00000479440 CHRM1P11229 460 aaPredicted RBP17.2■□□□□ 0.34
DDX56-210ENST00000479440 PLCG1P19174 1290 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms