RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 SV2CQ496J9 727 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 ZC2HC1CQ53FD0 456 aaPredicted RBP7.14□□□□□ -1.27
VCP-205ENST00000479300 ARHGAP15Q53QZ3 475 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 SPATA1Q5VX52 437 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 PMS2CLQ68D20 193 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 TXNDC8Q6A555 127 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 OVOS1Q6IE37 1185 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 JADE1Q6IE81 842 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 SYT13Q7L8C5 426 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 SFR1Q86XK3 245 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 NT5DC4Q86YG4 428 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 SFTPA1Q8IWL2 248 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 CMTM8Q8IZV2 173 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 DEFB124Q8NES8 71 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 RPLP0P6Q8NHW5 317 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 GIPC2Q8TF65 315 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 ZCCHC14Q8WYQ9 949 aaKnown RBP7.14□□□□□ -1.27
VCP-205ENST00000479300 KCNN1Q92952 543 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 SENP8Q96LD8 212 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 ZNF560Q96MR9 790 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 CLIC6Q96NY7 704 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 GCNAQ96QF7 691 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 SLC22A12Q96S37 553 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 HELZ2Q9BYK8 2649 aaKnown RBP7.14□□□□□ -1.27
VCP-205ENST00000479300 CUEDC2Q9H467 287 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 ST6GALNAC4Q9H4F1 302 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 TMEM206Q9H813 350 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 PANK4Q9NVE7 773 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 DPP3Q9NY33 737 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 TBC1D7Q9P0N9 293 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 EBF1Q9UH73 591 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 CPSF3Q9UKF6 684 aaKnown RBP7.14□□□□□ -1.27
VCP-205ENST00000479300 LHX6Q9UPM6 363 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 SCN1AP35498 2009 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 THADAQ6YHU6 1953 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 CELSR3Q9NYQ7 3312 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 ASH1LQ9NR48 2969 aaKnown RBP7.13□□□□□ -1.27
VCP-205ENST00000479300 TMEM8BA6NDV4 472 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 SOBPA7XYQ1 873 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 ANKRD63C9JTQ0 380 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 KIAA0391O15091 583 aaKnown RBP7.13□□□□□ -1.27
VCP-205ENST00000479300 SPTLC2O15270 562 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 CUTAO60888 179 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 ATG13O75143 517 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 APBB3O95704 486 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 ADRB2P07550 413 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 SLFN14P0C7P3 912 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 CEACAM1P13688 526 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 PNPLA4P41247 253 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 ACOT2P49753 483 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 TAF6P49848 677 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 NLRP12P59046 1061 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 LILRA4P59901 499 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 SMARCB1Q12824 385 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 DMC1Q14565 340 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 SURF1Q15526 300 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 ELF2Q15723 593 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 CCDC142Q17RM4 750 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 SLC39A12Q504Y0 691 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 SDHAF4Q5VUM1 108 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 SCARA3Q6AZY7 606 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 FAM173BQ6P4H8 233 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 ZNF720Q7Z2F6 126 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 PIP4P1Q86T03 277 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 ITIH5Q86UX2 942 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 DCP1BQ8IZD4 617 aaKnown RBP7.13□□□□□ -1.27
VCP-205ENST00000479300 PDILTQ8N807 584 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 FRMD1Q8N878 549 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 MAB21L3Q8N8X9 362 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 IQUBQ8NA54 791 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 USP28Q96RU2 1077 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 SEPT5Q99719 369 aaPredicted RBP7.13□□□□□ -1.27
VCP-205ENST00000479300 P2RY13Q9BPV8 354 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 PYM1Q9BRP8 204 aaKnown RBP7.13□□□□□ -1.27
VCP-205ENST00000479300 FAM213AQ9BRX8 229 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 TPSD1Q9BZJ3 242 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 FAM117AQ9C073 453 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 ZCWPW1Q9H0M4 648 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 TMEM9BQ9NQ34 198 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 TMEM74BQ9NUR3 256 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 TMLHEQ9NVH6 421 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 TFIP11Q9UBB9 837 aaKnown RBP7.13□□□□□ -1.27
VCP-205ENST00000479300 HSFX1Q9UBD0 423 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 CFAP45Q9UL16 551 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 MTMR6Q9Y217 621 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 C2CD2Q9Y426 696 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 MORC2Q9Y6X9 1032 aaPredicted RBP7.13□□□□□ -1.27
VCP-205ENST00000479300 PCNX2A6NKB5 2137 aa7.13□□□□□ -1.27
VCP-205ENST00000479300 BPTFQ12830 3046 aa7.12□□□□□ -1.27
VCP-205ENST00000479300 SPAARA0A1B0GVQ0 90 aa7.12□□□□□ -1.27
VCP-205ENST00000479300 ANO9A1A5B4 782 aa7.12□□□□□ -1.27
VCP-205ENST00000479300 MYMKA6NI61 221 aa7.12□□□□□ -1.27
VCP-205ENST00000479300 VGLL3A8MV65 326 aa7.12□□□□□ -1.27
VCP-205ENST00000479300 PIRO00625 290 aa7.12□□□□□ -1.27
VCP-205ENST00000479300 CYB561D2O14569 222 aa7.12□□□□□ -1.27
VCP-205ENST00000479300 HUS1O60921 280 aa7.12□□□□□ -1.27
VCP-205ENST00000479300 PPP6R2O75170 966 aa7.12□□□□□ -1.27
VCP-205ENST00000479300 RHOBTB1O94844 696 aa7.12□□□□□ -1.27
VCP-205ENST00000479300 CLSTN1O94985 981 aa7.12□□□□□ -1.27
VCP-205ENST00000479300 YEATS4O95619 227 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms