RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 RPL22P35268 128 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 HPCAL1P37235 193 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 TMPRSS15P98073 1019 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CDK17Q00537 523 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 LRRC74AQ0VAA2 488 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 LHFPL3Q86UP9 236 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 C2orf69Q8N8R5 385 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SLC4A11Q8NBS3 891 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 OR51D1Q8NGF3 324 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 AFG1LQ8WV93 481 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SPATA17Q96L03 361 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SPOCK3Q9BQ16 436 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 LRRC1Q9BTT6 524 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CPVLQ9H3G5 476 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 KLHL11Q9NVR0 708 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CHORDC1Q9UHD1 332 aaPredicted RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 DLGAP3O95886 979 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 PLA2G4BP0C869 781 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 DBTP11182 482 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 MYBPC3Q14896 1274 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 C12orf60Q5U649 245 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 NLRP14Q86W24 1093 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 EPHX4Q8IUS5 362 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 AGGF1Q8N302 714 aaeCLIP5.61□□□□□ -1.51
USF3-202ENST00000478658 SLC35F6Q8N357 371 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 LCORLQ8N3X6 602 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SNX31Q8N9S9 440 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 RTKNQ9BST9 563 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 VPS33BQ9H267 617 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 EHD3Q9NZN3 535 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SNX12Q9UMY4 172 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 PCDHGB2Q9Y5G2 931 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CCDC61Q9Y6R9 512 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 TSPOAP1O95153 1857 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CTTNBP2Q8WZ74 1663 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 VWA3AA6NCI4 1184 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 GRM8O00222 908 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 NDUFS3O75489 264 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CCNDBP1O95273 360 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 PSKH1P11801 424 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SWT1Q5T5J6 900 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 PLA2G4FQ68DD2 849 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 TTLL10Q6ZVT0 673 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CXXC5Q7LFL8 322 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 DNAJB7Q7Z6W7 309 aaPredicted RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 ZBTB8BQ8NAP8 495 aaPredicted RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 OMA1Q96E52 524 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 PIGSQ96S52 555 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 FAM213AQ9BRX8 229 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 C17orf80Q9BSJ5 609 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SLC6A15Q9H2J7 730 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 C3orf14Q9HBI5 128 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 PEX16Q9Y5Y5 336 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 KDM2BQ8NHM5 1336 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 ABCC12Q96J65 1359 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 C19orf81C9J6K1 198 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SLC28A1O00337 649 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 TSPAN4O14817 238 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SOAT2O75908 522 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 ATG12O94817 140 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 OXSR1O95747 527 aaPredicted RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 GSTT2P0CG29 244 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 GSTT2BP0CG30 244 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 TECP42680 631 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SELENOVP59797 346 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 RPS7P62081 194 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 TRIM32Q13049 653 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 TNFAIP8L3Q5GJ75 292 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 TTI2Q6NXR4 508 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 BARGINQ6ZT62 677 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 METTL16Q86W50 562 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 ELOA2Q8IYF1 753 aaPredicted RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 ANKFN1Q8N957 763 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 MCPH1Q8NEM0 835 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 UPF1Q92900 1129 aaKnown RBP eCLIP5.61□□□□□ -1.51
USF3-202ENST00000478658 FAM149B1Q96BN6 582 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 MYL10Q9BUA6 226 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 FRMD8P1Q9BZ68 369 aaPredicted RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 LDAHQ9H6V9 325 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CHRAC1Q9NRG0 131 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 DNAJB4Q9UDY4 337 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SRRDQ9UH36 339 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 AURKCQ9UQB9 309 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CDYLQ9Y232 598 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 PFASO15067 1338 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 DPPA5A6NC42 116 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SGSM2O43147 1006 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 TIMM44O43615 452 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SERPINE1P05121 402 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 GSSP48637 474 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CASP6P55212 293 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 EHHADHQ08426 723 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 ITGB3BPQ13352 177 aaPredicted RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 RNF43Q68DV7 783 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 TAF2Q6P1X5 1199 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CASP12Q6UXS9 341 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 METTL3Q86U44 580 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 KSR1Q8IVT5 923 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 MCEMP1Q8IX19 187 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms