RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	CPXM1	Q96SM3	734 aa		10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	NT5C1A	Q9BXI3	368 aa		10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	SLC4A5	Q9BY07	1137 aa		10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	EIF2A	Q9BY44	585 aa	Known RBP	10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	OSBPL7	Q9BZF2	842 aa		10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	MIS12	Q9H081	205 aa		10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	FAM204A	Q9H8W3	233 aa		10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	AGO3	Q9H9G7	860 aa	Known RBP	10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	TMBIM4	Q9HC24	238 aa		10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	CYLD	Q9NQC7	956 aa		10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	VPS18	Q9P253	973 aa		10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	PADI3	Q9ULW8	664 aa		10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	UBQLN1	Q9UMX0	589 aa	Known RBP	10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	ST3GAL5	Q9UNP4	418 aa		10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	NME7	Q9Y5B8	376 aa		10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.07	□□□□□ -0.8
ATG7-223	ENST00000478638	COL4A4	P53420	1690 aa	Predicted RBP	10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	CEP290	O15078	2479 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	hCG_1818297	A0A087WSY0	165 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	SRRM3	A6NNA2	597 aa	Predicted RBP	10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	HMGB1P1	B2RPK0	211 aa	Predicted RBP	10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	RECQL4	O94761	1208 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	BAIAP3	O94812	1187 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	GJB6	O95452	261 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	ECEL1	O95672	775 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	ERBB2	P04626	1255 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	KRT19	P08727	400 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	CD19	P15391	556 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	FGFR4	P22455	802 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	RFC1	P35251	1148 aa	Predicted RBP	10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	PCK1	P35558	622 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	NDST1	P52848	882 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	EIF3B	P55884	814 aa	Known RBP	10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	CAV1	Q03135	178 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	ZNF844	Q08AG5	666 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	MYO1E	Q12965	1108 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	SHH	Q15465	462 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	ZNF394	Q53GI3	561 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	SGO2	Q562F6	1265 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	C9orf57	Q5W0N0	161 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	ADAT2	Q7Z6V5	191 aa	Known RBP	10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	TMEM110	Q86TL2	294 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	FAM228A	Q86W67	206 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	TMEM130	Q8N3G9	435 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	CMAS	Q8NFW8	434 aa	Predicted RBP	10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	ATL2	Q8NHH9	583 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	FBXO25	Q8TCJ0	367 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	HERVK_113	Q902F9	699 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	MCEE	Q96PE7	176 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	FTHL17	Q9BXU8	183 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	FOXP3	Q9BZS1	431 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	CXCL16	Q9H2A7	254 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	PABPC3	Q9H361	631 aa	Known RBP	10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	PLEKHA4	Q9H4M7	779 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	CHST7	Q9NS84	486 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	SNTG2	Q9NY99	539 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	PLAA	Q9Y263	795 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	DRG1	Q9Y295	367 aa	Known RBP	10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	R3HDM2	Q9Y2K5	976 aa	Known RBP	10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	SLC4A7	Q9Y6M7	1214 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	PDE4DIP	Q5VU43	2346 aa		10.06	□□□□□ -0.8
ATG7-223	ENST00000478638	FAM170A	A1A519	330 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	GOLGA6C	A6NDK9	693 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	ZNF487	B1APH4	448 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638		F8VP50	259 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	ENPP3	O14638	875 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	PPEF2	O14830	753 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	XPOT	O43592	962 aa	Known RBP	10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	LRCH4	O75427	683 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	GOLGA6D	P0CG33	693 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	KRT3	P12035	628 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	RARG	P13631	454 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	TCF4	P15884	667 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	ITIH2	P19823	946 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	KLRC2	P26717	231 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	SSTR3	P32745	418 aa	Predicted RBP	10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	CETN2	P41208	172 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	PNPLA4	P41247	253 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	CDKN2B	P42772	138 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	ARSE	P51690	589 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	YARS	P54577	528 aa	Known RBP	10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	PSMC1	P62191	440 aa	Known RBP	10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	DHX9	Q08211	1270 aa	Known RBP	10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	OASL	Q15646	514 aa	Known RBP	10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	CCDC142	Q17RM4	750 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	TNFAIP8L3	Q5GJ75	292 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	C9orf50	Q5SZB4	431 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	DCUN1D2	Q6PH85	259 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	MFSD7	Q6UXD7	560 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	KDM7A	Q6ZMT4	941 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	SPOCD1	Q6ZMY3	1216 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	DPH6	Q7L8W6	267 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	TDH	Q8IZJ6	230 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	SMG8	Q8ND04	991 aa	Known RBP	10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	JOSD2	Q8TAC2	188 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	FAM76A	Q8TAV0	307 aa		10.05	□□□□□ -0.8
ATG7-223	ENST00000478638	SLC35B2	Q8TB61	432 aa		10.05	□□□□□ -0.8

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