RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 LPAL2Q16609 132 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 ZNF699Q32M78 642 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 FOXD4L6Q3SYB3 417 aaPredicted RBP15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 TDRD10Q5VZ19 366 aaKnown RBP15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 FOXD4L3Q6VB84 417 aaPredicted RBP15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 ARL14EPQ8N8R7 260 aaPredicted RBP15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 STKLD1Q8NE28 680 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 NETO1Q8TDF5 533 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 SH3RF2Q8TEC5 729 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 CD101Q93033 1021 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 CCDC34Q96HJ3 373 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 PCED1BQ96HM7 432 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 LOXL4Q96JB6 756 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 FAM84AQ96KN4 292 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 TTLL2Q9BWV7 592 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 DNAI2Q9GZS0 605 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 BLZF1Q9H2G9 400 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 CRTAC1Q9NQ79 661 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 PCDHA7Q9UN72 937 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 ATP2C2O75185 946 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 RPP40O75818 363 aaKnown RBP15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 RTN3O95197 1032 aaPredicted RBP15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 CCDC192P0DO97 292 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 ARSAP15289 507 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 PTPN1P18031 435 aaKnown RBP15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 LMO2P25791 158 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 GJA4P35212 333 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 SPEM2Q0P670 501 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 CSRP2Q16527 193 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 ZNF667Q5HYK9 610 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 FSTL4Q6MZW2 842 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 CACNA2D4Q7Z3S7 1137 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 B3GALNT2Q8NCR0 500 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 GAB3Q8WWW8 586 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 OVCA2Q8WZ82 227 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 NXF1Q9UBU9 619 aaKnown RBP15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 TCHHQ07283 1943 aa15.39■□□□□ 0.05
SMARCE1-209ENST00000478349 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 C2orf78A6NCI8 922 aa15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 F8VP50 259 aa15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 HCRTO43612 131 aa15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 RNF40O75150 1001 aa15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 DDX1Q92499 740 aaKnown RBP15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 MRPL45Q9BRJ2 306 aaKnown RBP15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 IMPG2Q9BZV3 1241 aa15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 VRTNQ9H8Y1 702 aa15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 SEMA4GQ9NTN9 838 aa15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 GCNT4Q9P109 453 aa15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 FRMD4BQ9Y2L6 1034 aa15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 ATP6V1DQ9Y5K8 247 aa15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 WNT6Q9Y6F9 365 aa15.38■□□□□ 0.05
SMARCE1-209ENST00000478349 DMDP11532 3685 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 HRO43593 1189 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 APBB3O95704 486 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 ABL1P00519 1130 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 EGFP01133 1207 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 RPN1P04843 607 aaKnown RBP15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 MYL6P60660 151 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 KRT85P78386 507 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 SLC7A9P82251 487 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 CUL4BQ13620 913 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 NCOA4Q13772 614 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 CCDC142Q17RM4 750 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 EML3Q32P44 896 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 WDR44Q5JSH3 913 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 SYT13Q7L8C5 426 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 C11orf74Q86VG3 221 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 SLC9A9Q8IVB4 645 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 TMEM174Q8WUU8 243 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 TAF4BQ92750 862 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 CYP2S1Q96SQ9 504 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 MED10Q9BTT4 135 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 DMAP1Q9NPF5 467 aaPredicted RBP15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 RCOR1Q9UKL0 485 aa15.37■□□□□ 0.05
SMARCE1-209ENST00000478349 ZNF840PA6NDX5 716 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 OTOL1A6NHN0 477 aaPredicted RBP15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 LEFTY2O00292 366 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 PDXKO00764 312 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 CALUO43852 315 aaPredicted RBP15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 ADH1CP00326 375 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 CST3P01034 146 aaPredicted RBP15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 YWHAQP27348 245 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 GALK1P51570 392 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 DNM1Q05193 864 aaKnown RBP15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 DMWDQ09019 674 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 ELF2Q15723 593 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 PREPLQ4J6C6 727 aaPredicted RBP15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 PRR23CQ6ZRP0 262 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 NUP93Q8N1F7 819 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 FAM160A2Q8N612 972 aaPredicted RBP15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 C12orf50Q8NA57 414 aaPredicted RBP15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 RPLP0P6Q8NHW5 317 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 SMARCD1Q96GM5 515 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 SPATA32Q96LK8 384 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 SLC22A12Q96S37 553 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 TBC1D14Q9P2M4 693 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 SERTAD1Q9UHV2 236 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 PCDHGA5Q9Y5G8 931 aa15.36■□□□□ 0.05
SMARCE1-209ENST00000478349 CEP250Q9BV73 2442 aa15.35■□□□□ 0.05
SMARCE1-209ENST00000478349 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms