RNA–Protein interactions for RNA: ENST00000478172.1

TCAF1-204, Transcript of TRPM8 channel associated factor 1, human

TSL 4

Gene TCAF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCAF1-204	ENST00000478172	CDX4	O14627	284 aa	Predicted RBP	11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	ZZEF1	O43149	2961 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	ATP2C2	O75185	946 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	KLF8	O95600	359 aa	Predicted RBP	11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	BMP15	O95972	392 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	ABL1	P00519	1130 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	CSRP1	P21291	193 aa	Known RBP	11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	BDNF	P23560	247 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	TIE1	P35590	1138 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	GRIK1	P39086	918 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	RBP5	P82980	135 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	CYP27A1	Q02318	531 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	KDSR	Q06136	332 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	CRY1	Q16526	586 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	L1TD1	Q5T7N2	865 aa	Known RBP	11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	SCARA3	Q6AZY7	606 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	LPCAT2	Q7L5N7	544 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	FILIP1	Q7Z7B0	1213 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	RASSF3	Q86WH2	238 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	TMEFF1	Q8IYR6	380 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	PGBD3	Q8N328	593 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	ALLC	Q8N6M5	410 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	TOP6BL	Q8N6T0	577 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	SPATA18	Q8TC71	538 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	SYT15	Q9BQS2	421 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	NUSAP1	Q9BXS6	441 aa	Known RBP	11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	PCIF1	Q9H4Z3	704 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	PDE11A	Q9HCR9	933 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	ZDHHC4	Q9NPG8	344 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	SMPD4	Q9NXE4	827 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	GDAP2	Q9NXN4	497 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	TRPM5	Q9NZQ8	1165 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	SPEG	Q15772	3267 aa		11.31	□□□□□ -0.6
TCAF1-204	ENST00000478172	ATRX	P46100	2492 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	TMEM8B	A6NDV4	472 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	PPP1R37	O75864	691 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	LDHA	P00338	332 aa	Known RBP	11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	APOD	P05090	189 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	CYP17A1	P05093	508 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	CFI	P05156	583 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	IDE	P14735	1019 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	TCF3	P15923	654 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	MAGEA11	P43364	429 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	SLC6A11	P48066	632 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	MRPS21	P82921	87 aa	Known RBP	11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	ZXDB	P98169	803 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	IFRD2	Q12894	506 aa	Predicted RBP	11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	LMAN2	Q12907	356 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	MYO1E	Q12965	1108 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	REST	Q13127	1097 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	SF3A1	Q15459	793 aa	Known RBP	11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	SOWAHA	Q2M3V2	549 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	TMEM92	Q6UXU6	159 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	DENND5B	Q6ZUT9	1274 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	SFTPA1	Q8IWL2	248 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	FRMD1	Q8N878	549 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	KDF1	Q8NAX2	398 aa	Predicted RBP	11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	TXNDC5	Q8NBS9	432 aa	Known RBP	11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	WHAMM	Q8TF30	809 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	HMGB4	Q8WW32	186 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	ANKRD36BP1	Q96IX9	119 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	EPSTI1	Q96J88	318 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	CBWD1	Q9BRT8	395 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	SLC32A1	Q9H598	525 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	POLM	Q9NP87	494 aa	Predicted RBP	11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	SEL1L	Q9UBV2	794 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	SIX4	Q9UIU6	781 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	CDH9	Q9ULB4	789 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	WASF3	Q9UPY6	502 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	SMC3	Q9UQE7	1217 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	CPQ	Q9Y646	472 aa		11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	MYO18A	Q92614	2054 aa	Known RBP	11.3	□□□□□ -0.6
TCAF1-204	ENST00000478172	ZFYVE26	Q68DK2	2539 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	TCRBV21S2A2	A0A5A6	115 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	SGK1	O00141	431 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	GABRD	O14764	452 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	HYAL3	O43820	417 aa	Predicted RBP	11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	TNNC2	P02585	160 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	PDGFRB	P09619	1106 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	HOXB3	P14651	431 aa	Predicted RBP	11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.29	□□□□□ -0.6	2e-6	■■□□□ 12.2
TCAF1-204	ENST00000478172	GAP43	P17677	238 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	ENG	P17813	658 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	GART	P22102	1010 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	LMO2	P25791	158 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	P2RY2	P41231	377 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	PTGER3	P43115	390 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	CASP5	P51878	434 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	ATXN3	P54252	364 aa	Predicted RBP	11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	USP46	P62068	366 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	DHCR24	Q15392	516 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	GAB4	Q2WGN9	574 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	FAM171B	Q6P995	826 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	VSTM1	Q6UX27	236 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	USP49	Q70CQ1	688 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	IL17RC	Q8NAC3	791 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	CXorf38	Q8TB03	319 aa		11.29	□□□□□ -0.6
TCAF1-204	ENST00000478172	HPDL	Q96IR7	371 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms