RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 GIPC2Q8TF65 315 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 ING5Q8WYH8 240 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 CYFIP2Q96F07 1278 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 BPIFA3Q9BQP9 254 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 TRMT61BQ9BVS5 477 aaKnown RBP13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 ZNF518BQ9C0D4 1074 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 FBXO44Q9H4M3 255 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 SLITRK6Q9H5Y7 841 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 CNTN6Q9UQ52 1028 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 CHADO15335 359 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 AP1G2O75843 785 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 YWHAQP27348 245 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 AVPR1AP37288 418 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 RAD23BP54727 409 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 SLC8A3P57103 927 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 ZNF445P59923 1031 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 MAN2A1Q16706 1144 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 ARHGAP29Q52LW3 1261 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 TANGO2Q6ICL3 276 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 POTEHQ6S545 545 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 ARID3BQ8IVW6 561 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 UBR7Q8N806 425 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 SLC2A14Q8TDB8 520 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 RSAD2Q8WXG1 361 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 TATDN2Q93075 761 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 PBXIP1Q96AQ6 731 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 ZSWIM3Q96MP5 696 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 NELL2Q99435 816 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 ANP32EQ9BTT0 268 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 SLC46A2Q9BY10 475 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 OSBPL6Q9BZF3 934 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 TRPM5Q9NZQ8 1165 aa13.1□□□□□ -0.31
CLCNKA-205ENST00000477360 PTPRDP23468 1912 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 MYO10Q9HD67 2058 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 TRAV19A0A0A6YYK7 116 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 TADA3O75528 432 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 OLFM2O95897 454 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 USP17L7P0C7H9 530 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 VDRP11473 427 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 NPR3P17342 541 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 GPR15P49685 360 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 PSEN1P49768 467 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 STARD6P59095 220 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 CCDC142Q17RM4 750 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 LRSAM1Q6UWE0 723 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 GBP6Q6ZN66 633 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 HFE2Q6ZVN8 426 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 SUGP1Q8IWZ8 645 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 C12orf29Q8N999 325 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 ANKRD52Q8NB46 1076 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 SLC4A11Q8NBS3 891 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 STKLD1Q8NE28 680 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 DOCK6Q96HP0 2047 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 TWNKQ96RR1 684 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 MED10Q9BTT4 135 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 DDX23Q9BUQ8 820 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 DUSP16Q9BY84 665 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 ARHGEF3Q9NR81 526 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 KRT82Q9NSB4 513 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 TDP1Q9NUW8 608 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 THG1LQ9NWX6 298 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 HMGXB4Q9UGU5 601 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 FBXL21Q9UKT6 434 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 DAAM1Q9Y4D1 1078 aa13.09□□□□□ -0.31
CLCNKA-205ENST00000477360 ZDBF2Q9HCK1 2354 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 ZNF840PA6NDX5 716 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 HEPACAM2A8MVW5 462 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 NRG2O14511 850 aaPredicted RBP13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 DPYSL4O14531 572 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 ZDHHC11BP0C7U3 371 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 CD58P19256 250 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 ACO1P21399 889 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 RFX1P22670 979 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 MAGEA9P43362 315 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 MTIF2P46199 727 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 ZNF132P52740 706 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 GPC5P78333 572 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 SLC7A9P82251 487 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 VITQ6UXI7 678 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 CLEC20AQ6ZU45 233 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 C11orf57Q6ZUT1 292 aaPredicted RBP13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 DDX42Q86XP3 938 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 ZMIZ2Q8NF64 920 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 BPIFB1Q8TDL5 484 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 GPR152Q8TDT2 470 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 HEXIM2Q96MH2 286 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 SMOQ99835 787 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 ARID3AQ99856 593 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 KXD1Q9BQD3 176 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 RPP25Q9BUL9 199 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 NAT10Q9H0A0 1025 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 TMEM30AQ9NV96 361 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 GCNT4Q9P109 453 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 ARHGAP26Q9UNA1 814 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 MAGED2Q9UNF1 606 aaPredicted RBP13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 SCML2Q9UQR0 700 aa13.08□□□□□ -0.32
CLCNKA-205ENST00000477360 ARNTLO00327 626 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 CLDN5O00501 218 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 MAN2B1O00754 1011 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 ZNF263O14978 683 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms