RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SLITRK3O94933 977 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 ETS2P15036 469 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 CPA3P15088 417 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 ZNF76P36508 570 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 GPX6P59796 221 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 SLC18A2Q05940 514 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 PRKG1Q13976 671 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 RAPH1Q70E73 1250 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 RCOR2Q8IZ40 523 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 RAB3IL1Q8TBN0 382 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 HELQQ8TDG4 1101 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 DCAKDQ8WVC6 231 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 ZFRQ96KR1 1074 aaKnown RBP15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 MRPL47Q9HD33 250 aaKnown RBP15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 BLOC1S6Q9UL45 172 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 PPM1HQ9ULR3 514 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 FZD1Q9UP38 647 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 ZNF148Q9UQR1 794 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 SCINQ9Y6U3 715 aa15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.94■□□□□ 0.14
CLSTN1-205ENST00000477264 WDR46O15213 610 aaKnown RBP15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 PLA2G6O60733 806 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 MT-ND3P03897 115 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 ENO1P06733 434 aaKnown RBP15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 GLRA2P23416 452 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 ATG16L1Q676U5 607 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 KRT39Q6A163 491 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 TTC7BQ86TV6 843 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 PYROXD1Q8WU10 500 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 DHX38Q92620 1227 aaKnown RBP15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 NKD2Q969F2 451 aaPredicted RBP15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 HAUS1Q96CS2 278 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 HSPBP1Q9NZL4 362 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 CNTN3Q9P232 1028 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 ARHGEF35A5YM69 484 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 ADM5C9JUS6 153 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 E7ESA3 106 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 FAM155BO75949 473 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 ITGAVP06756 1048 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 PTPRAP18433 802 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 RPL5P46777 297 aaKnown RBP15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 VCPP55072 806 aaKnown RBP15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 SNAP25P60880 206 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 NFX1Q12986 1120 aaKnown RBP15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 SPP2Q13103 211 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 MTMR2Q13614 643 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 CYLC2Q14093 348 aaPredicted RBP15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 HIC1Q14526 733 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 USH1GQ495M9 461 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 EFHC1Q5JVL4 640 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 TRIM72Q6ZMU5 477 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 ZNF280CQ8ND82 737 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 APBB2Q92870 758 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 SIKE1Q9BRV8 207 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 THTPAQ9BU02 230 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 TMEM8AQ9HCN3 771 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 RAB20Q9NX57 234 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 SOX13Q9UN79 622 aa15.93■□□□□ 0.14
CLSTN1-205ENST00000477264 A6NJR5 290 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 HNRNPRO43390 633 aaKnown RBP15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 SPATA31D3P0C874 917 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 GTF2H1P32780 548 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 GRIA2P42262 883 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 NSFP46459 744 aaKnown RBP15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 SCNN1BP51168 640 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 BPIFB4P59827 614 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 ENPEPQ07075 957 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 SPATA31D4Q6ZUB0 917 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 OTOP1Q7RTM1 612 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 PASD1Q8IV76 773 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 PPIL6Q8IXY8 311 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 VCPIP1Q96JH7 1222 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 PRICKLE1Q96MT3 831 aaPredicted RBP15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 WDR18Q9BV38 432 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 FRMD8P1Q9BZ68 369 aaPredicted RBP15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 WDR11Q9BZH6 1224 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 Q9H521 79 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 DNPEPQ9ULA0 475 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 FARP1Q9Y4F1 1045 aaPredicted RBP15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 SSC5DA1L4H1 1573 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 IGLV3-22A0A075B6J6 115 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 DENND3A2RUS2 1198 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 CASQ2O14958 399 aaPredicted RBP15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 CCNT2O60583 730 aaKnown RBP15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 ZC3H11AO75152 810 aaKnown RBP eCLIP15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 PSMD10O75832 226 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 BGNP21810 368 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 CCNFP41002 786 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 INHBCP55103 352 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 PDK3Q15120 406 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 CAPN12Q6ZSI9 719 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 USP37Q86T82 979 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 CYTH2Q99418 400 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 P2RX7Q99572 595 aaKnown RBP15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 LBHD1Q9BQE6 289 aaPredicted RBP15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 ST6GALNAC4Q9H4F1 302 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 THEGQ9P2T0 379 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 HSFX1Q9UBD0 423 aa15.92■□□□□ 0.14
CLSTN1-205ENST00000477264 PPARGC1AQ9UBK2 798 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms