RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 ACP6Q9NPH0 428 aa13.21□□□□□ -0.29
APTX-220ENST00000476858 FANCLQ9NW38 375 aa13.21□□□□□ -0.29
APTX-220ENST00000476858 TAB2Q9NYJ8 693 aa13.21□□□□□ -0.29
APTX-220ENST00000476858 CCL26Q9Y258 94 aa13.21□□□□□ -0.29
APTX-220ENST00000476858 ASB3Q9Y575 518 aa13.21□□□□□ -0.29
APTX-220ENST00000476858 DENND4CQ5VZ89 1909 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 KRBA1A5PL33 1030 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 KCNJ18B7U540 433 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 ZNF197O14709 1029 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 PNMA6AP0CW24 399 aaPredicted RBP13.2□□□□□ -0.3
APTX-220ENST00000476858 MTIF2P46199 727 aaKnown RBP13.2□□□□□ -0.3
APTX-220ENST00000476858 KLK7P49862 253 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 ZXDBP98169 803 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 KCNMA1Q12791 1236 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 KCNJ12Q14500 433 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 STX1AQ16623 288 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 TPD52L1Q16890 204 aaPredicted RBP13.2□□□□□ -0.3
APTX-220ENST00000476858 ANO6Q4KMQ2 910 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 SASS6Q6UVJ0 657 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 VSTM1Q6UX27 236 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 CLEC20AQ6ZU45 233 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 ITIH5Q86UX2 942 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 TTC30AQ86WT1 665 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 ARID3BQ8IVW6 561 aaPredicted RBP13.2□□□□□ -0.3
APTX-220ENST00000476858 PPM1KQ8N3J5 372 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 MAB21L3Q8N8X9 362 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 ENOX1Q8TC92 643 aaKnown RBP13.2□□□□□ -0.3
APTX-220ENST00000476858 CYFIP2Q96F07 1278 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 TNIP3Q96KP6 325 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 SPATA17Q96L03 361 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 MYRFLQ96LU7 910 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 HNRNPABQ99729 332 aaKnown RBP13.2□□□□□ -0.3
APTX-220ENST00000476858 SLITRK6Q9H5Y7 841 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 GDE1Q9NZC3 331 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 GCNT4Q9P109 453 aa13.2□□□□□ -0.3
APTX-220ENST00000476858 COL4A2P08572 1712 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 PATJQ8NI35 1801 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 TMEM221A6NGB7 291 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 SHISA7A6NL88 538 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 M0R296 226 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 MICAL2O94851 1124 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 CSH1P0DML2 217 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 CSH2P0DML3 217 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 PON1P27169 355 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 MAPRE1Q15691 268 aaKnown RBP13.19□□□□□ -0.3
APTX-220ENST00000476858 TAF12Q16514 161 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 TCP11X2Q5H9J9 407 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 TRIM65Q6PJ69 517 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 AOPEPQ8N6M6 819 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 CCDC150Q8NCX0 1101 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 SMARCD2Q92925 531 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 TRMT2BQ96GJ1 504 aaKnown RBP13.19□□□□□ -0.3
APTX-220ENST00000476858 TMEM176AQ96HP8 235 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 ZFYVE19Q96K21 471 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 HEXIM2Q96MH2 286 aaKnown RBP13.19□□□□□ -0.3
APTX-220ENST00000476858 NT5C1BQ96P26 610 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 TUBGCP2Q9BSJ2 902 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 TTLL2Q9BWV7 592 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 IGSF9Q9P2J2 1179 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 CA14Q9ULX7 337 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 DUSP12Q9UNI6 340 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 ANAPC1Q9H1A4 1944 aa13.19□□□□□ -0.3
APTX-220ENST00000476858 SYCE3A1L190 88 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 HEPACAM2A8MVW5 462 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 BECN2A8MW95 431 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 SCAMP3O14828 347 aaKnown RBP13.18□□□□□ -0.3
APTX-220ENST00000476858 P4HA2O15460 535 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 FGFR1OPO95684 399 aaKnown RBP13.18□□□□□ -0.3
APTX-220ENST00000476858 ATP1A3P13637 1013 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 ALADP13716 330 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 NPR3P17342 541 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 BRD2P25440 801 aaKnown RBP13.18□□□□□ -0.3
APTX-220ENST00000476858 ZNF132P52740 706 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 SLC5A3P53794 718 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 SIGLEC14Q08ET2 396 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 TAF10Q12962 218 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 KRT31Q15323 416 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 MAN2A1Q16706 1144 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 GOLGA7BQ2TAP0 167 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 KLHL40Q2TBA0 621 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 VWA3BQ502W6 1294 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 TMEM270Q6UE05 265 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 DENND5BQ6ZUT9 1274 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 APTXQ7Z2E3 356 aaKnown RBP13.18□□□□□ -0.3
APTX-220ENST00000476858 DHX40Q8IX18 779 aaKnown RBP13.18□□□□□ -0.3
APTX-220ENST00000476858 ARL14EPQ8N8R7 260 aaPredicted RBP13.18□□□□□ -0.3
APTX-220ENST00000476858 LEMD2Q8NC56 503 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 UBA3Q8TBC4 463 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 NDRG1Q92597 394 aaKnown RBP13.18□□□□□ -0.3
APTX-220ENST00000476858 USP13Q92995 863 aaPredicted RBP13.18□□□□□ -0.3
APTX-220ENST00000476858 WBP2Q969T9 261 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 SMARCD1Q96GM5 515 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 RNF38Q9H0F5 515 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 VPS16Q9H269 839 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 NDST4Q9H3R1 872 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 TASP1Q9H6P5 420 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 CSNK1G1Q9HCP0 422 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 TRPC7Q9HCX4 862 aa13.18□□□□□ -0.3
APTX-220ENST00000476858 UBE2TQ9NPD8 197 aaPredicted RBP13.18□□□□□ -0.3
APTX-220ENST00000476858 DMAP1Q9NPF5 467 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms