RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 CYFIP2Q96F07 1278 aa8.23□□□□□ -1.09
RBM39-230ENST00000476806 CEP295NLQ96MC4 621 aa8.23□□□□□ -1.09
RBM39-230ENST00000476806 TBCBQ99426 244 aa8.23□□□□□ -1.09
RBM39-230ENST00000476806 ARID3AQ99856 593 aa8.23□□□□□ -1.09
RBM39-230ENST00000476806 ADAM2Q99965 735 aa8.23□□□□□ -1.09
RBM39-230ENST00000476806 FERMT1Q9BQL6 677 aa8.23□□□□□ -1.09
RBM39-230ENST00000476806 C11orf70Q9BRQ4 267 aa8.23□□□□□ -1.09
RBM39-230ENST00000476806 APOL6Q9BWW8 343 aa8.23□□□□□ -1.09
RBM39-230ENST00000476806 COL25A1Q9BXS0 654 aaPredicted RBP8.23□□□□□ -1.09
RBM39-230ENST00000476806 PACSIN1Q9BY11 444 aa8.23□□□□□ -1.09
RBM39-230ENST00000476806 LRFN2Q9ULH4 789 aa8.23□□□□□ -1.09
RBM39-230ENST00000476806 UTP11Q9Y3A2 253 aaKnown RBP8.23□□□□□ -1.09
RBM39-230ENST00000476806 PCDHA3Q9Y5H8 950 aa8.23□□□□□ -1.09
RBM39-230ENST00000476806 EYSQ5T1H1 3165 aa8.23□□□□□ -1.09
RBM39-230ENST00000476806 MYH10P35580 1976 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 ARL5CA6NH57 179 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 ZNF487B1APH4 448 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 KRIT1O00522 736 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 SYN3O14994 580 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 CEP104O60308 925 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 CSDE1O75534 798 aaKnown RBP8.22□□□□□ -1.09
RBM39-230ENST00000476806 ZRANB2O95218 330 aaKnown RBP eCLIP8.22□□□□□ -1.093e-8■■□□□ 14
RBM39-230ENST00000476806 GAS8O95995 478 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 CYP11A1P05108 521 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 KRT3P12035 628 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 FGFR4P22455 802 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 PCK1P35558 622 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 MLH1P40692 756 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 AARSP49588 968 aaKnown RBP eCLIP8.22□□□□□ -1.09
RBM39-230ENST00000476806 NDST1P52848 882 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 LILRA4P59901 499 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 ZNF200P98182 395 aaPredicted RBP8.22□□□□□ -1.09
RBM39-230ENST00000476806 PLCB3Q01970 1234 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 PDCLQ13371 301 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 MAMLD1Q13495 774 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 DSC3Q14574 896 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 SMC1AQ14683 1233 aaKnown RBP8.22□□□□□ -1.09
RBM39-230ENST00000476806 LPIN1Q14693 890 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 ELF2Q15723 593 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 EFHC1Q5JVL4 640 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 EMBQ6PCB8 327 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 DCLRE1AQ6PJP8 1040 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 LIMS2Q7Z4I7 341 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 CDR2LQ86X02 465 aaPredicted RBP8.22□□□□□ -1.09
RBM39-230ENST00000476806 ECHDC2Q86YB7 292 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 CREG2Q8IUH2 290 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 PSTKQ8IV42 348 aaKnown RBP8.22□□□□□ -1.09
RBM39-230ENST00000476806 TMEM192Q8IY95 271 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 KATNAL2Q8IYT4 538 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 RCOR2Q8IZ40 523 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 SLC4A11Q8NBS3 891 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 B3GALNT2Q8NCR0 500 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 SMG8Q8ND04 991 aaKnown RBP8.22□□□□□ -1.09
RBM39-230ENST00000476806 BBOF1Q8ND07 529 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 EXD1Q8NHP7 514 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 CPA5Q8WXQ8 436 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 TSC1Q92574 1164 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 RNPC3Q96LT9 517 aaKnown RBP8.22□□□□□ -1.09
RBM39-230ENST00000476806 UBXN6Q9BZV1 441 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 RNF208Q9H0X6 261 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 SMYD3Q9H7B4 428 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 EHD2Q9NZN4 543 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 STIM2Q9P246 746 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 TSPAN16Q9UKR8 245 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 RAB21Q9UL25 225 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 STAP1Q9ULZ2 295 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 STXBP5LQ9Y2K9 1186 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 PCDHB7Q9Y5E2 793 aa8.22□□□□□ -1.09
RBM39-230ENST00000476806 DNMT3AQ9Y6K1 912 aaPredicted RBP8.22□□□□□ -1.09
RBM39-230ENST00000476806 TRIP12Q14669 1992 aaPredicted RBP8.21□□□□□ -1.09
RBM39-230ENST00000476806 CYB561D2O14569 222 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 GABRDO14764 452 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 XPO1O14980 1071 aaKnown RBP8.21□□□□□ -1.1
RBM39-230ENST00000476806 MICAL2O94851 1124 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 TJP3O95049 919 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 IGHA1P01876 353 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 FAM200BP0CF97 657 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 COMTP21964 271 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 RRM1P23921 792 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 AKAP5P24588 427 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 BRD2P25440 801 aaKnown RBP8.21□□□□□ -1.1
RBM39-230ENST00000476806 CD52P31358 61 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 PTPN7P35236 360 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 PLA2G4AP47712 749 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 CDK7P50613 346 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 EPHB4P54760 987 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 PSMC1P62191 440 aaKnown RBP8.21□□□□□ -1.1
RBM39-230ENST00000476806 RNASELQ05823 741 aaKnown RBP8.21□□□□□ -1.1
RBM39-230ENST00000476806 NFE2Q16621 373 aaPredicted RBP8.21□□□□□ -1.1
RBM39-230ENST00000476806 LONRF2Q1L5Z9 754 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 ERCC6LQ2NKX8 1250 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 TRIM71Q2Q1W2 868 aaKnown RBP8.21□□□□□ -1.1
RBM39-230ENST00000476806 ZNF394Q53GI3 561 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 ZFYVE27Q5T4F4 411 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 ZNF618Q5T7W0 954 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 MMS22LQ6ZRQ5 1243 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 BZW1Q7L1Q6 419 aaKnown RBP8.21□□□□□ -1.1
RBM39-230ENST00000476806 CROCCP2Q86T23 111 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 FAM126BQ8IXS8 530 aa8.21□□□□□ -1.1
RBM39-230ENST00000476806 DCP1BQ8IZD4 617 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms