RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PLCD4Q9BRC7 762 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 MIS12Q9H081 205 aa17.27■□□□□ 0.35
TMEM53-208ENST00000476724 TRIP12Q14669 1992 aaPredicted RBP17.26■□□□□ 0.35
TMEM53-208ENST00000476724 EXOC1LA0A1B0GW35 172 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 DNAJC8O75937 253 aaPredicted RBP17.26■□□□□ 0.35
TMEM53-208ENST00000476724 RNF8O76064 485 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 F2P00734 622 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 HMGCRP04035 888 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 NFICP08651 508 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 ZSCAN5DPP0CG00 497 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 VDRP11473 427 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 CREB1P16220 341 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 SLC18A1P54219 525 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 JADE1Q6IE81 842 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 JOSD2Q8TAC2 188 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 MCRS1Q96EZ8 462 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 CPXM1Q96SM3 734 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 SENP1Q9P0U3 644 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 CYTH4Q9UIA0 394 aa17.26■□□□□ 0.35
TMEM53-208ENST00000476724 RASSF9O75901 435 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 ITGB3P05106 788 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 STX2P32856 288 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 RAP1GAPP47736 663 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 CDH8P55286 799 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 MYO1EQ12965 1108 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 HIC1Q14526 733 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 LRRC14Q15048 493 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 NT5DC4Q86YG4 428 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 TMEM192Q8IY95 271 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 ARFGAP1Q8N6T3 406 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 ANKRD42Q8N9B4 389 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 CMASQ8NFW8 434 aaPredicted RBP17.25■□□□□ 0.35
TMEM53-208ENST00000476724 MGARPQ8TDB4 240 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 MAGEB18Q96M61 343 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 TMEM121Q9BTD3 319 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 SDCBP2Q9H190 292 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 TBK1Q9UHD2 729 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 KIAA1257Q9ULG3 409 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.25■□□□□ 0.35
TMEM53-208ENST00000476724 USP15Q9Y4E8 981 aaPredicted RBP17.25■□□□□ 0.35
TMEM53-208ENST00000476724 TCP11X1B4DZS4 312 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 RASA4BC9J798 803 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 RASA4O43374 803 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 CST8O60676 142 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 TOMM70O94826 608 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 SUN1O94901 812 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 STAU1O95793 577 aaKnown RBP17.25■□□□□ 0.35
TMEM53-208ENST00000476724 OAS1P00973 400 aaKnown RBP17.25■□□□□ 0.35
TMEM53-208ENST00000476724 SMIM10L2AP0DMW4 78 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 SMIM10L2BP0DMW5 78 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 ETS1P14921 441 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 AMHR2Q16671 573 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 TRPM8Q7Z2W7 1104 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 SRRM1Q8IYB3 904 aaKnown RBP17.25■□□□□ 0.35
TMEM53-208ENST00000476724 KIAA0319LQ8IZA0 1049 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 CXorf38Q8TB03 319 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 ACTL9Q8TC94 416 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 TRIB2Q92519 343 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 ZWILCHQ9H900 591 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 METTL5Q9NRN9 209 aaKnown RBP17.25■□□□□ 0.35
TMEM53-208ENST00000476724 ASNSD1Q9NWL6 643 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 SLC24A2Q9UI40 661 aa17.25■□□□□ 0.35
TMEM53-208ENST00000476724 MICAL2O94851 1124 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 PCK1P35558 622 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 FCGRTP55899 365 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 OTUD4Q01804 1114 aaKnown RBP17.24■□□□□ 0.35
TMEM53-208ENST00000476724 XRCC4Q13426 336 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 NUGGCQ68CJ6 796 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 PPIL6Q8IXY8 311 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 PRCCQ92733 491 aaPredicted RBP17.24■□□□□ 0.35
TMEM53-208ENST00000476724 ACSF2Q96CM8 615 aaPredicted RBP17.24■□□□□ 0.35
TMEM53-208ENST00000476724 GRAMD1AQ96CP6 724 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 ELOVL4Q9GZR5 314 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 PDZD7Q9H5P4 517 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 FETUBQ9UGM5 382 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 FARP1Q9Y4F1 1045 aaPredicted RBP17.24■□□□□ 0.35
TMEM53-208ENST00000476724 MYADML2A6NDP7 307 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 FAM47DPA6NHR8 397 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 IFNB1P01574 187 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 ERBB2P04626 1255 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 MYL3P08590 195 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 IL1R2P27930 398 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 GPD2P43304 727 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 FLT3LGP49771 235 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 IL9RQ01113 521 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 TMEM62Q0P6H9 643 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 TRIM32Q13049 653 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 MPP2Q14168 576 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 MFSD10Q14728 455 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 TRABD2AQ86V40 505 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 GBP7Q8N8V2 638 aaPredicted RBP17.24■□□□□ 0.35
TMEM53-208ENST00000476724 KCTD6Q8NC69 237 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 NLRP7Q8WX94 980 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 RSAD2Q8WXG1 361 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 HAUS1Q96CS2 278 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 CPB2Q96IY4 423 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 SMYD3Q9H7B4 428 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 SLC40A1Q9NP59 571 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 KLC4Q9NSK0 619 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 ITGA11Q9UKX5 1188 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms