RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 VRTNQ9H8Y1 702 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 TDP1Q9NUW8 608 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 MAGED2Q9UNF1 606 aaPredicted RBP17.27■□□□□ 0.36
COL1A1-205ENST00000476387 DCHS1Q96JQ0 3298 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 CETN3O15182 167 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 PAPSS2O95340 614 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-205ENST00000476387 FAM163BP0C2L3 166 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 TRIM49P0CI25 452 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 TRIM49CP0CI26 452 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 LMO2P25791 158 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 CXCL12P48061 93 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 ENPEPQ07075 957 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 CCDC142Q17RM4 750 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 SDHAF4Q5VUM1 108 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 TXNDC8Q6A555 127 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 TXNDC11Q6PKC3 985 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 SCARA5Q6ZMJ2 495 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 ERMP1Q7Z2K6 904 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 KIAA2013Q8IYS2 634 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 SYNPOQ8N3V7 929 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 USP13Q92995 863 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-205ENST00000476387 SECISBP2LQ93073 1101 aaKnown RBP17.26■□□□□ 0.35
COL1A1-205ENST00000476387 MYLPFQ96A32 169 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 FAM83CQ9BQN1 747 aa17.26■□□□□ 0.35
COL1A1-205ENST00000476387 MRPL45Q9BRJ2 306 aaKnown RBP17.26■□□□□ 0.35
COL1A1-205ENST00000476387 MAGEC2Q9UBF1 373 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-205ENST00000476387 SMG5Q9UPR3 1016 aaKnown RBP17.26■□□□□ 0.35
COL1A1-205ENST00000476387 KIF26AQ9ULI4 1882 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-205ENST00000476387 A8MXQ7 604 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 PSMA7O14818 248 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 ATP2C2O75185 946 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 VNN1O95497 513 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 PPP1R2P41236 205 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 UBE2HP62256 183 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 CYP27A1Q02318 531 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 TNK2Q07912 1038 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 GAS6Q14393 721 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 SGSM1Q2NKQ1 1148 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 MDH1BQ5I0G3 518 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 VSTM1Q6UX27 236 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 SV2AQ7L0J3 742 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 SCN4BQ8IWT1 228 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 GPR161Q8N6U8 529 aaKnown RBP17.25■□□□□ 0.35
COL1A1-205ENST00000476387 TAF4BQ92750 862 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 SPATA17Q96L03 361 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 SMYD3Q9H7B4 428 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 MMRN2Q9H8L6 949 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 CRTAC1Q9NQ79 661 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 GKN1Q9NS71 199 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 NCDNQ9UBB6 729 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 CCL26Q9Y258 94 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 ANAPC1Q9H1A4 1944 aa17.25■□□□□ 0.35
COL1A1-205ENST00000476387 TADA3O75528 432 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 HLA-DRAP01903 254 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 GCLMP48507 274 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 LRRC63Q05C16 580 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 CCINQ13939 588 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 PON2Q15165 354 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 WDR44Q5JSH3 913 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 C1orf220Q5T0J3 134 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 DCLK2Q8N568 766 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 CCDC150Q8NCX0 1101 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 STKLD1Q8NE28 680 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 TTC8Q8TAM2 541 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 MYCBPAPQ8TBZ2 947 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 EEF2KMTQ96G04 330 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 RBM12Q9NTZ6 932 aaKnown RBP17.24■□□□□ 0.35
COL1A1-205ENST00000476387 MAN1B1Q9UKM7 699 aa17.24■□□□□ 0.35
COL1A1-205ENST00000476387 SLC16A3O15427 465 aaKnown RBP17.23■□□□□ 0.35
COL1A1-205ENST00000476387 STX10O60499 249 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 ASS1P00966 412 aaKnown RBP17.23■□□□□ 0.35
COL1A1-205ENST00000476387 PTPN1P18031 435 aaKnown RBP17.23■□□□□ 0.35
COL1A1-205ENST00000476387 ANXA13P27216 316 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 HOXA6P31267 233 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 RAP1GAPP47736 663 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 FKBP3Q00688 224 aaKnown RBP17.23■□□□□ 0.35
COL1A1-205ENST00000476387 AMPD2Q01433 879 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 SATB1Q01826 763 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 RUNX3Q13761 415 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 PDGFRLQ15198 375 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 ISM2Q6H9L7 571 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 CC2D1AQ6P1N0 951 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-205ENST00000476387 Q6ZS52 159 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 B3GALNT2Q8NCR0 500 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 PCED1BQ96HM7 432 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 TMEM8AQ9HCN3 771 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 HPS4Q9NQG7 708 aa17.23■□□□□ 0.35
COL1A1-205ENST00000476387 HELZP42694 1942 aaKnown RBP17.23■□□□□ 0.35
COL1A1-205ENST00000476387 ATP8B3O60423 1300 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 TRAV19A0A0A6YYK7 116 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 TRIM49BA6NDI0 452 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 TRIM66O15016 1216 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 USP17L7P0C7H9 530 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 PFKLP17858 780 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 TRIM21P19474 475 aaKnown RBP17.22■□□□□ 0.35
COL1A1-205ENST00000476387 BDNFP23560 247 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 GTF2H1P32780 548 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 GRIK1P39086 918 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 MXI1P50539 228 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 CDH8P55286 799 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms