RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 SHC4Q6S5L8 630 aa14.01□□□□□ -0.17
MRPL55-228ENST00000476267 STXBP4Q6ZWJ1 553 aa14.01□□□□□ -0.17
MRPL55-228ENST00000476267 KIAA1958Q8N8K9 716 aa14.01□□□□□ -0.17
MRPL55-228ENST00000476267 C8orf48Q96LL4 319 aa14.01□□□□□ -0.17
MRPL55-228ENST00000476267 CGRRF1Q99675 332 aa14.01□□□□□ -0.17
MRPL55-228ENST00000476267 MRPL45Q9BRJ2 306 aaKnown RBP14.01□□□□□ -0.17
MRPL55-228ENST00000476267 KIAA1586Q9HCI6 787 aa14.01□□□□□ -0.17
MRPL55-228ENST00000476267 SPAG17Q6Q759 2223 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 UBE4BO95155 1302 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 TNRC6BQ9UPQ9 1833 aaKnown RBP14□□□□□ -0.17
MRPL55-228ENST00000476267 ZNF840PA6NDX5 716 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 K7EQS6 105 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 LEFTY2O00292 366 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 SPTLC2O15270 562 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 STAU1O95793 577 aaKnown RBP14□□□□□ -0.17
MRPL55-228ENST00000476267 OAS1P00973 400 aaKnown RBP14□□□□□ -0.17
MRPL55-228ENST00000476267 FAM163BP0C2L3 166 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 CCDC192P0DO97 292 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 HDCP19113 662 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 MPLP40238 635 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 SLC7A9P82251 487 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 CYP27A1Q02318 531 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 CYP24A1Q07973 514 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 DMC1Q14565 340 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 KCNB1Q14721 858 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 PSMD6Q15008 389 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 FAM26FQ5R3K3 315 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 USP33Q8TEY7 942 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 SCFD1Q8WVM8 642 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 ZNF516Q92618 1163 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 EXOC4Q96A65 974 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 ACDQ96AP0 544 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 C7orf25Q9BPX7 421 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 LRRC27Q9C0I9 530 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 RNF38Q9H0F5 515 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 XYLT2Q9H1B5 865 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 DPEP3Q9H4B8 488 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 SMOC1Q9H4F8 434 aa14□□□□□ -0.17
MRPL55-228ENST00000476267 ATG2BQ96BY7 2078 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 F8VP50 259 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 TULP1O00294 542 aaPredicted RBP13.99□□□□□ -0.17
MRPL55-228ENST00000476267 TRIM66O15016 1216 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 YEATS4O95619 227 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 NFATC1O95644 943 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 APBB3O95704 486 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 PDGFRBP09619 1106 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 GRIK1P39086 918 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 PDE6CP51160 858 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 STK38Q15208 465 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 BMT2Q1RMZ1 405 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 AASDHQ4L235 1098 aaPredicted RBP13.99□□□□□ -0.17
MRPL55-228ENST00000476267 MDH1BQ5I0G3 518 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 RASSF3Q86WH2 238 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 C12orf56Q8IXR9 622 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 DDX1Q92499 740 aaKnown RBP13.99□□□□□ -0.17
MRPL55-228ENST00000476267 TRPM5Q9NZQ8 1165 aa13.99□□□□□ -0.17
MRPL55-228ENST00000476267 WDFY3Q8IZQ1 3526 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 PLXND1Q9Y4D7 1925 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 K7ELQ4 463 aaPredicted RBP13.98□□□□□ -0.17
MRPL55-228ENST00000476267 DCLK1O15075 740 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 CUTAO60888 179 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 KRT37O76014 449 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 CYP17A1P05093 508 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 DLATP10515 647 aaKnown RBP13.98□□□□□ -0.17
MRPL55-228ENST00000476267 PMLP29590 882 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 GNL1P36915 607 aaPredicted RBP13.98□□□□□ -0.17
MRPL55-228ENST00000476267 PPP3CCP48454 512 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 SNRPFP62306 86 aaKnown RBP13.98□□□□□ -0.17
MRPL55-228ENST00000476267 ASIC1P78348 528 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 MESP2Q0VG99 397 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 STPG1Q5TH74 334 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 UNC13DQ70J99 1090 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 FILIP1Q7Z7B0 1213 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 ADGRG2Q8IZP9 1017 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 C12orf50Q8NA57 414 aaPredicted RBP13.98□□□□□ -0.17
MRPL55-228ENST00000476267 RDH13Q8NBN7 331 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 PLEKHO2Q8TD55 490 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 DHX58Q96C10 678 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 ZFRQ96KR1 1074 aaKnown RBP13.98□□□□□ -0.17
MRPL55-228ENST00000476267 MMS19Q96T76 1030 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 VRTNQ9H8Y1 702 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 VPS45Q9NRW7 570 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 EHD2Q9NZN4 543 aa13.98□□□□□ -0.17
MRPL55-228ENST00000476267 TFIP11Q9UBB9 837 aaKnown RBP13.98□□□□□ -0.17
MRPL55-228ENST00000476267 CLIC2O15247 247 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 HNRNPLP14866 589 aaKnown RBP eCLIP13.97□□□□□ -0.17
MRPL55-228ENST00000476267 PTPN1P18031 435 aaKnown RBP13.97□□□□□ -0.17
MRPL55-228ENST00000476267 TNNI1P19237 187 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 ANXA13P27216 316 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 CASP1P29466 404 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 AMPD3Q01432 767 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 TAF10Q12962 218 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 NR1H3Q13133 447 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 WDR72Q3MJ13 1102 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 PMS2CLQ68D20 193 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 TCEAL6Q6IPX3 200 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 SFTPA1Q8IWL2 248 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 IQUBQ8NA54 791 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 XXYLT1Q8NBI6 393 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms