RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ALOX12P18054 663 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 GNAT2P19087 354 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 CR2P20023 1033 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 SLC6A2P23975 617 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 IL1R2P27930 398 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 AKT1P31749 480 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 ACTN2P35609 894 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 COPAP53621 1224 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 AMOTQ4VCS5 1084 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 ATPAF1Q5TC12 328 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-207ENST00000476169 ACAD10Q6JQN1 1059 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 MFSD5Q6N075 450 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 EFCAB12Q6NXP0 572 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 CRTC1Q6UUV9 634 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 ARHGEF18Q6ZSZ5 1173 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 FAM83AQ86UY5 434 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 SNX32Q86XE0 403 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 SIAH1Q8IUQ4 282 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 FITM2Q8N6M3 262 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 SLC17A8Q8NDX2 589 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 TMIEQ8NEW7 156 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 C3orf49Q96BT1 292 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 TMEM176AQ96HP8 235 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 LRRC37BQ96QE4 947 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 LMF1Q96S06 567 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 CPPED1Q9BRF8 314 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-207ENST00000476169 RTKNQ9BST9 563 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 AGXT2Q9BYV1 514 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 IMPG2Q9BZV3 1241 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 MS4A7Q9GZW8 240 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-207ENST00000476169 PCDHAC1Q9H158 963 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 MSL2Q9HCI7 577 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 TMEM8AQ9HCN3 771 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 FAM30AQ9NZY2 134 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 TBC1D29Q9UFV1 150 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 AGAP1Q9UPQ3 857 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 RRP7AQ9Y3A4 280 aaKnown RBP4.7□□□□□ -1.66
VPS13D-207ENST00000476169 AP3D1O14617 1153 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 NUAK1O60285 661 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 DOK2O60496 412 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 FAM155BO75949 473 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 ITGB1P05556 798 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 APOA4P06727 396 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 TXNP10599 105 aaKnown RBP4.69□□□□□ -1.66
VPS13D-207ENST00000476169 CHMP24386 653 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 MAN2A2P49641 1150 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 CCR5P51681 352 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 CCR9P51686 369 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 BCAT1P54687 386 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 ALDH18A1P54886 795 aaKnown RBP4.69□□□□□ -1.66
VPS13D-207ENST00000476169 CHRNDQ07001 517 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 CUL4AQ13619 759 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 EFR3AQ14156 821 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 ERV3-1Q14264 604 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 RPS6KA2Q15349 733 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 RILPL1Q5EBL4 403 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 SLC9C2Q5TAH2 1124 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 TCERG1LQ5VWI1 586 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 LGI4Q8N135 537 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 TMEM57Q8N5G2 664 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 VGLL2Q8N8G2 317 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 FAM46DQ8NEK8 389 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 SCAMP5Q8TAC9 235 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 CPT1CQ8TCG5 803 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 ADAMTS15Q8TE58 950 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 SPSB4Q96A44 273 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 KLHL32Q96NJ5 620 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 GDF15Q99988 308 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 PLA2G12BQ9BX93 195 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 BRD8Q9H0E9 1235 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 PABPC3Q9H361 631 aaKnown RBP4.69□□□□□ -1.66
VPS13D-207ENST00000476169 GHITMQ9H3K2 345 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 EPS8L2Q9H6S3 715 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 ACAD9Q9H845 621 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 SEC61A2Q9H9S3 476 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 POGKQ9P215 609 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 XPR1Q9UBH6 696 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 ADD3Q9UEY8 706 aaKnown RBP4.69□□□□□ -1.66
VPS13D-207ENST00000476169 ZMYND8Q9ULU4 1186 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-207ENST00000476169 TBX20Q9UMR3 447 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 CLCA2Q9UQC9 943 aa4.69□□□□□ -1.66
VPS13D-207ENST00000476169 BICDL2A1A5D9 508 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 H0Y3Z8 333 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 SPTLC2O15270 562 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 DNPH1O43598 174 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 NOBOXO60393 691 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 KIF20AO95235 890 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 TK1P04183 234 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 HSP90AB1P08238 724 aaKnown RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 GLULP15104 373 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 PECAM1P16284 738 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 EGR1P18146 543 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 OAS2P29728 719 aaKnown RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 CTNNA1P35221 906 aaKnown RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 RPS19P39019 145 aaKnown RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 RAP1GAPP47736 663 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 KCNC1P48547 511 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 SEC24CP53992 1094 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 PPP2CBP62714 309 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 PPP2CAP67775 309 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms