RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 TM9SF2Q99805 663 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 LRFN3Q9BTN0 628 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 PRDM14Q9GZV8 571 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 TMX1Q9H3N1 280 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 ACBD3Q9H3P7 528 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 CAPN10Q9HC96 672 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 ENTPD7Q9NQZ7 604 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 GJB4Q9NTQ9 266 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 ANO10Q9NW15 660 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 DDX25Q9UHL0 483 aaKnown RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 TCFL5Q9UL49 500 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 PCDHA7Q9UN72 937 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 GINS2Q9Y248 185 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 NOC2LQ9Y3T9 749 aaKnown RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 NR2E1Q9Y466 385 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 TELO2Q9Y4R8 837 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 CLIC4Q9Y696 253 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 ZFHX2Q9C0A1 2572 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 CEP250Q9BV73 2442 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 MIA3Q5JRA6 1907 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 TRIP11Q15643 1979 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 EP300Q09472 2414 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 PLXNA3P51805 1871 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 IGKV6-21A0A0C4DH24 114 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 A0A1B0GVL5 298 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 CHMP2AO43633 222 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 MGEA5O60502 916 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 SEMA7AO75326 666 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 MAFO75444 373 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 SMC2O95347 1197 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 C1RP00736 705 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 VTNP04004 478 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 TNNT1P13805 278 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 AXLP30530 894 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 LTBRP36941 435 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 CTSKP43235 329 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 RAP1GAPP47736 663 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 QARSP47897 775 aaKnown RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 SOX9P48436 509 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 NDUFA8P51970 172 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 PMS1P54277 932 aaKnown RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 PCBP3P57721 371 aaKnown RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 NLRP11P59045 1033 aaKnown RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 RACK1P63244 317 aaKnown RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 CREMQ03060 361 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 ITIH3Q06033 890 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 ADAM15Q13444 863 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 GNL2Q13823 731 aaKnown RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 TRIM29Q14134 588 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 TFDP1Q14186 410 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 MXD4Q14582 209 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 TMEM266Q2M3C6 531 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 MTERF2Q49AM1 385 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 ZNF394Q53GI3 561 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 ANKRD39Q53RE8 183 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 ISM2Q6H9L7 571 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 TWF2Q6IBS0 349 aaKnown RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 KCNT2Q6UVM3 1135 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 TMEM184AQ6ZMB5 413 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 EP400NLQ6ZTU2 488 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 SRGAP1Q7Z6B7 1085 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 MTERF4Q7Z6M4 381 aaKnown RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 FILIP1Q7Z7B0 1213 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 PPFIBP1Q86W92 1011 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 DHX40Q8IX18 779 aaKnown RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 CEP57L1Q8IYX8 460 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 CNNM3Q8NE01 707 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 ENGASEQ8NFI3 743 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 URGCPQ8TCY9 931 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 PSPC1Q8WXF1 523 aaKnown RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 SUSD6Q92537 303 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 PGBD4Q96DM1 585 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 C16orf45Q96MC5 204 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 AIFM3Q96NN9 605 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 LXNQ9BS40 222 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 PHF20Q9BVI0 1012 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 PHF7Q9BWX1 381 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 FOXP3Q9BZS1 431 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 UNC45AQ9H3U1 944 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 TLE6Q9H808 572 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 KCNMB3Q9NPA1 279 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 UBN1Q9NPG3 1134 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 CRTAC1Q9NQ79 661 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 AGPAT5Q9NUQ2 364 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 TRMT1Q9NXH9 659 aaKnown RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 SPG21Q9NZD8 308 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 DPP7Q9UHL4 492 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 PIN4Q9Y237 131 aaKnown RBP4.63□□□□□ -1.67
VPS13D-206ENST00000476045 COL4A3BPQ9Y5P4 624 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 IRAK3Q9Y616 596 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 PHLPP2Q6ZVD8 1323 aa4.63□□□□□ -1.67
VPS13D-206ENST00000476045 OTOGLQ3ZCN5 2332 aa4.62□□□□□ -1.67
VPS13D-206ENST00000476045 FANCMQ8IYD8 2048 aa4.62□□□□□ -1.67
VPS13D-206ENST00000476045 A0A1W2PQ27 194 aa4.62□□□□□ -1.67
VPS13D-206ENST00000476045 A0A1W2PQ64 194 aa4.62□□□□□ -1.67
VPS13D-206ENST00000476045 A0A1W2PQD8 194 aa4.62□□□□□ -1.67
VPS13D-206ENST00000476045 USP27XA6NNY8 438 aa4.62□□□□□ -1.67
VPS13D-206ENST00000476045 SMTNL1A8MU46 457 aa4.62□□□□□ -1.67
VPS13D-206ENST00000476045 LOC730098B7Z3J9 87 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms