RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 SORCS3Q9UPU3 1222 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 PATJQ8NI35 1801 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 F8VP50 259 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 GOLGA6L19H0YKK7 550 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 CLDN5O00501 218 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 AP1G2O75843 785 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 NOL4O94818 638 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 FAM200BP0CF97 657 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 VDRP11473 427 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 MYL4P12829 197 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 CCDC130P13994 396 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 ACO1P21399 889 aaKnown RBP16.03■□□□□ 0.16
SNX13-207ENST00000475800 GBP2P32456 591 aaPredicted RBP16.03■□□□□ 0.16
SNX13-207ENST00000475800 CDR1P51861 262 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 NTHL1P78549 312 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 ORC1Q13415 861 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 STILQ15468 1287 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 FILIP1LQ4L180 1135 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 SGO2Q562F6 1265 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 PRSS36Q5K4E3 855 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 ARHGAP17Q68EM7 881 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 LRSAM1Q6UWE0 723 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 TMC8Q8IU68 726 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 C12orf29Q8N999 325 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 GIPC2Q8TF65 315 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 KREMEN1Q96MU8 473 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 LRRC3Q9BY71 257 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 GPR88Q9GZN0 384 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 TSPY26PQ9H489 355 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 KRT82Q9NSB4 513 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 GDE1Q9NZC3 331 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 EPS15L1Q9UBC2 864 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 CDH7Q9ULB5 785 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 CNTN6Q9UQ52 1028 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 OBSL1O75147 1896 aa16.03■□□□□ 0.16
SNX13-207ENST00000475800 SLC38A8A6NNN8 435 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 RTN3O95197 1032 aaPredicted RBP16.02■□□□□ 0.16
SNX13-207ENST00000475800 GPR15P49685 360 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 SLC8A3P57103 927 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 ARHGAP15Q53QZ3 475 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 DENND5BQ6ZUT9 1274 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 PAQR9Q6ZVX9 377 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 HS6ST3Q8IZP7 471 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 RBBP8NLQ8NC74 664 aaPredicted RBP16.02■□□□□ 0.16
SNX13-207ENST00000475800 KAT5Q92993 513 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 MYRFLQ96LU7 910 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 MFSD1Q9H3U5 465 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 CSNK1G1Q9HCP0 422 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 PNPLA8Q9NP80 782 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 SIX2Q9NPC8 291 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 PLCB1Q9NQ66 1216 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 COMMD8Q9NX08 183 aa16.02■□□□□ 0.16
SNX13-207ENST00000475800 ANAPC1Q9H1A4 1944 aa16.02■□□□□ 0.15
SNX13-207ENST00000475800 SOBPA7XYQ1 873 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 LAMP2P13473 410 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 ATP1A3P13637 1013 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 CD19P15391 556 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 HMGA1P17096 107 aaKnown RBP16.01■□□□□ 0.15
SNX13-207ENST00000475800 NPR3P17342 541 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 GABRR2P28476 465 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 ADORA2BP29275 332 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 PPP3CCP48454 512 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 ZNF132P52740 706 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 UBXN1Q04323 297 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 KCNMA1Q12791 1236 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 SLC5A9Q2M3M2 681 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 PPP1R26Q5T8A7 1209 aaPredicted RBP16.01■□□□□ 0.15
SNX13-207ENST00000475800 SDHAF4Q5VUM1 108 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 LUZP1Q86V48 1076 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 NPAS3Q8IXF0 933 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 NUP93Q8N1F7 819 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 ITFG1Q8TB96 612 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 GPR152Q8TDT2 470 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 SHC3Q92529 594 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 FGF13Q92913 245 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 NXPE3Q969Y0 559 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 ERGIC2Q96RQ1 377 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 MYADMQ96S97 322 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 LSM14BQ9BX40 385 aaKnown RBP16.01■□□□□ 0.15
SNX13-207ENST00000475800 DUSP16Q9BY84 665 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 HESX1Q9UBX0 185 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 DNAJC12Q9UKB3 198 aa16.01■□□□□ 0.15
SNX13-207ENST00000475800 MAGED2Q9UNF1 606 aaPredicted RBP16.01■□□□□ 0.15
SNX13-207ENST00000475800 NUP210Q8TEM1 1887 aaPredicted RBP16■□□□□ 0.15
SNX13-207ENST00000475800 KRT5P13647 590 aa16■□□□□ 0.15
SNX13-207ENST00000475800 DDX6P26196 483 aaKnown RBP eCLIP16■□□□□ 0.15
SNX13-207ENST00000475800 ARHGAP44Q17R89 818 aa16■□□□□ 0.15
SNX13-207ENST00000475800 KLHDC7AQ5VTJ3 777 aa16■□□□□ 0.15
SNX13-207ENST00000475800 GAREM2Q75VX8 874 aa16■□□□□ 0.15
SNX13-207ENST00000475800 MTSS1LQ765P7 747 aa16■□□□□ 0.15
SNX13-207ENST00000475800 APTXQ7Z2E3 356 aaKnown RBP16■□□□□ 0.15
SNX13-207ENST00000475800 ANKRD52Q8NB46 1076 aa16■□□□□ 0.15
SNX13-207ENST00000475800 FLCNQ8NFG4 579 aa16■□□□□ 0.15
SNX13-207ENST00000475800 ST13P5Q8NFI4 369 aaPredicted RBP16■□□□□ 0.15
SNX13-207ENST00000475800 SHKBP1Q8TBC3 707 aa16■□□□□ 0.15
SNX13-207ENST00000475800 SMOQ99835 787 aa16■□□□□ 0.15
SNX13-207ENST00000475800 TTLL2Q9BWV7 592 aa16■□□□□ 0.15
SNX13-207ENST00000475800 ATXN3LQ9H3M9 355 aa16■□□□□ 0.15
SNX13-207ENST00000475800 ZNF334Q9HCZ1 680 aaPredicted RBP16■□□□□ 0.15
SNX13-207ENST00000475800 IGSF9Q9P2J2 1179 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms