RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 MYLPFQ96A32 169 aa13.28□□□□□ -0.28
CCDC57-208ENST00000475635 SPATA17Q96L03 361 aa13.28□□□□□ -0.28
CCDC57-208ENST00000475635 LSM14BQ9BX40 385 aaKnown RBP13.28□□□□□ -0.28
CCDC57-208ENST00000475635 INTS13Q9NVM9 706 aa13.28□□□□□ -0.28
CCDC57-208ENST00000475635 CDH9Q9ULB4 789 aa13.28□□□□□ -0.28
CCDC57-208ENST00000475635 ZNF233A6NK53 670 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 KIAA0391O15091 583 aaKnown RBP13.27□□□□□ -0.29
CCDC57-208ENST00000475635 NFATC1O95644 943 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 PDGFRBP09619 1106 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 BDNFP23560 247 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 ANXA13P27216 316 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 GBP1P32455 592 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 SEC13P55735 322 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 USP46P62068 366 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 ZXDBP98169 803 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 CUL4AQ13619 759 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 MAPRE1Q15691 268 aaKnown RBP13.27□□□□□ -0.29
CCDC57-208ENST00000475635 DUOXA2Q1HG44 320 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 C2orf27AQ580R0 203 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 VSTM1Q6UX27 236 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 DENND5BQ6ZUT9 1274 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 CBWD2Q8IUF1 395 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 CCDC65Q8IXS2 484 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 TSTD1Q8NFU3 115 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 CCDC26Q8TAB7 109 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 CRTAC1Q9NQ79 661 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 INVSQ9Y283 1065 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 CACNA1EQ15878 2313 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 CACNA1GO43497 2377 aa13.27□□□□□ -0.29
CCDC57-208ENST00000475635 BCLAF3A2AJT9 711 aaKnown RBP13.26□□□□□ -0.29
CCDC57-208ENST00000475635 K7EQS6 105 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 LEFTY2O00292 366 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 TRIM66O15016 1216 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 KCNK5O95279 499 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 CAVIN2O95810 425 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 PFKLP17858 780 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 WARSP23381 471 aaKnown RBP13.26□□□□□ -0.29
CCDC57-208ENST00000475635 OPRD1P41143 372 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 SHC2P98077 582 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 SURF1Q15526 300 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 FAM208BQ5VWN6 2430 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 PSAPL1Q6NUJ1 521 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 STXBP4Q6ZWJ1 553 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 PDILTQ8N807 584 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 GLIS3Q8NEA6 775 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 USP33Q8TEY7 942 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 HPS3Q969F9 1004 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 PCED1BQ96HM7 432 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 CEP295NLQ96MC4 621 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 USP28Q96RU2 1077 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 MMS19Q96T76 1030 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 EDEM2Q9BV94 578 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 TPSD1Q9BZJ3 242 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 HSPBP1Q9NZL4 362 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 TRPM5Q9NZQ8 1165 aa13.26□□□□□ -0.29
CCDC57-208ENST00000475635 ZNF840PA6NDX5 716 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 ANTXRLA6NF34 631 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 SYT1P21579 422 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 SLC39A14Q15043 492 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 GAB4Q2WGN9 574 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 USP39Q53GS9 565 aaKnown RBP13.25□□□□□ -0.29
CCDC57-208ENST00000475635 MDH1BQ5I0G3 518 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 PMS2CLQ68D20 193 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 ANO7Q6IWH7 933 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 FILIP1Q7Z7B0 1213 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 RASSF3Q86WH2 238 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 WDR49Q8IV35 697 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 CCDC33Q8N5R6 958 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 MYCBPAPQ8TBZ2 947 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 MRPL45Q9BRJ2 306 aaKnown RBP13.25□□□□□ -0.29
CCDC57-208ENST00000475635 TTLL2Q9BWV7 592 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 RNF38Q9H0F5 515 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 EHD2Q9NZN4 543 aa13.25□□□□□ -0.29
CCDC57-208ENST00000475635 MORC2Q9Y6X9 1032 aaPredicted RBP13.25□□□□□ -0.29
CCDC57-208ENST00000475635 IGF2RP11717 2491 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 LNP1A1A4G5 178 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 C4orf47A7E2U8 309 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 F8VP50 259 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 OLFM2O95897 454 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 ABL1P00519 1130 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 CYP17A1P05093 508 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 DLATP10515 647 aaKnown RBP13.24□□□□□ -0.29
CCDC57-208ENST00000475635 HOXD13P35453 343 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 GNL1P36915 607 aaPredicted RBP13.24□□□□□ -0.29
CCDC57-208ENST00000475635 PPP3CCP48454 512 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 NOP14P78316 857 aaKnown RBP13.24□□□□□ -0.29
CCDC57-208ENST00000475635 SLC7A9P82251 487 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 HS2ST1Q7LGA3 356 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 TRAPPC11Q7Z392 1133 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 C11orf74Q86VG3 221 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 TTC30AQ86WT1 665 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 RDH13Q8NBN7 331 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 MDGA1Q8NFP4 955 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 OR6B3Q8NGW1 331 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 CNOT6LQ96LI5 555 aaKnown RBP13.24□□□□□ -0.29
CCDC57-208ENST00000475635 TNMDQ9H2S6 317 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 SNX25Q9H3E2 840 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 KIAA1586Q9HCI6 787 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 SMPD4Q9NXE4 827 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 MMP17Q9ULZ9 603 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms