RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 LMO2P25791 158 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 LILRA4P59901 499 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 PLCB3Q01970 1234 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 KRT71Q3SY84 523 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 ZNF618Q5T7W0 954 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 TMEM110Q86TL2 294 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 SERINC5Q86VE9 423 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 SCUBE3Q8IX30 993 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 HACE1Q8IYU2 909 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 STK32AQ8WU08 396 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 HSPH1Q92598 858 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 WNT8BQ93098 351 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 ZFP42Q96MM3 310 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 TSPYL1Q9H0U9 437 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 PTGESO14684 152 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 TP73O15350 636 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 CHRNA1P02708 482 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 ASGR1P07306 291 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 NR1D1P20393 614 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 ADORA2BP29275 332 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 DYNLT1P63172 113 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 SLC6A3Q01959 620 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 SLC29A2Q14542 456 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 RHBDF2Q6PJF5 856 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 OLFML1Q6UWY5 402 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 ADGRF2Q8IZF7 708 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 CCHCR1Q8TD31 782 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 CAPS2Q9BXY5 557 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 SENP6Q9GZR1 1112 aaPredicted RBP16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 FAM105AQ9NUU6 356 aa16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 DRG1Q9Y295 367 aaKnown RBP16.13■□□□□ 0.17
RPUSD3-215ENST00000475470 ADAMTS4O75173 837 aa16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 CCDC130P13994 396 aa16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 LRPAP1P30533 357 aa16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 NKX3-2P78367 333 aa16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 BST2Q10589 180 aaKnown RBP16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 CDO1Q16878 200 aa16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 SKIDA1Q1XH10 827 aa16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 C15orf59Q2T9L4 293 aaPredicted RBP16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 SH3PXD2AQ5TCZ1 1133 aa16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 TRNP1Q6NT89 227 aa16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 ANKRD52Q8NB46 1076 aa16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 CMASQ8NFW8 434 aaPredicted RBP16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 PPP1R10Q96QC0 940 aaKnown RBP16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 CHST12Q9NRB3 414 aa16.12■□□□□ 0.17
RPUSD3-215ENST00000475470 CST8O60676 142 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 SHBGP04278 402 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 DESP17661 470 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 KLRC2P26717 231 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 CCND3P30281 292 aaPredicted RBP16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 ACTN2P35609 894 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 ATP1A2P50993 1020 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 BCAT1P54687 386 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 VCPP55072 806 aaKnown RBP16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 SKOR1P84550 965 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 TAF5Q15542 800 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 KCNA10Q16322 511 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 IZUMO3Q5VZ72 239 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 KDM7AQ6ZMT4 941 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 PRUNE1Q86TP1 453 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 HOOK3Q86VS8 718 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 ZDHHC17Q8IUH5 632 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 TOP6BLQ8N6T0 577 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 TTC13Q8NBP0 860 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 SMC1BQ8NDV3 1235 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 TNIP3Q96KP6 325 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 GPR182O15218 404 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 PRPSAP2O60256 369 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 RPLP2P05387 115 aaKnown RBP16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 CD48P09326 243 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 CCDC14Q49A88 953 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 AGBL2Q5U5Z8 902 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 BBS12Q6ZW61 710 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 TRMT10CQ7L0Y3 403 aaKnown RBP16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 LIMS2Q7Z4I7 341 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 RFX6Q8HWS3 928 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 ALLCQ8N6M5 410 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 NKD2Q969F2 451 aaPredicted RBP16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 CFAP57Q96MR6 1250 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 CALN1Q9BXU9 219 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 SLC38A7Q9NVC3 462 aa16.11■□□□□ 0.17
RPUSD3-215ENST00000475470 MEIS3P2A8K0S8 358 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 CYB561D2O14569 222 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 PAPSS1O43252 624 aaPredicted RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 RIPK2O43353 540 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 SHOX2O60902 331 aaPredicted RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 ITGAVP06756 1048 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 SDC4P31431 198 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 CHKAP35790 457 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 THPOP40225 353 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 MLH1P40692 756 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 ATP11AP98196 1134 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 TAZQ16635 292 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 P3H1Q32P28 736 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 SLC2A14Q8TDB8 520 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 PEBP4Q96S96 227 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 B3GNT5Q9BYG0 378 aa16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 GPBP1L1Q9HC44 474 aaPredicted RBP16.1■□□□□ 0.17
RPUSD3-215ENST00000475470 AAASQ9NRG9 546 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms