RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SLC47A2Q86VL8 602 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 COLEC11Q9BWP8 271 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 F5H5T6 163 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 ICAM1P05362 532 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 CKMP06732 381 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 TMEM253P0C7T8 217 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 RUBCNQ92622 972 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 GPATCH2LQ9NWQ4 482 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 RASSF9O75901 435 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 TFE3P19532 575 aaPredicted RBP11.36□□□□□ -0.59
VAPB-204ENST00000475243 KCNA3P22001 575 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 ZNF677Q86XU0 584 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 ARID3BQ8IVW6 561 aaPredicted RBP11.36□□□□□ -0.59
VAPB-204ENST00000475243 KCNB2Q92953 911 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 STAMBPL1Q96FJ0 436 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 PPP1R2P1Q96PQ5 205 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 UNKQ9C0B0 810 aaKnown RBP11.36□□□□□ -0.59
VAPB-204ENST00000475243 ABCA6Q8N139 1617 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 F8W810 466 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 FAM107AO95990 144 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 ATP6V1B1P15313 513 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 CHI3L1P36222 383 aaPredicted RBP11.36□□□□□ -0.59
VAPB-204ENST00000475243 HIST2H2ACQ16777 129 aaPredicted RBP11.36□□□□□ -0.59
VAPB-204ENST00000475243 HIST2H2AA3Q6FI13 130 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 LRIG3Q6UXM1 1119 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 DEFB128Q7Z7B8 93 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 LINC00523Q86TU6 105 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 TUBGCP3Q96CW5 907 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 VWA5AO00534 786 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 FDPSP14324 419 aaKnown RBP11.36□□□□□ -0.59
VAPB-204ENST00000475243 ALOX15P16050 662 aaPredicted RBP11.36□□□□□ -0.59
VAPB-204ENST00000475243 SOX10P56693 466 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 TFDP3Q5H9I0 405 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 UGT3A1Q6NUS8 523 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 SGSM3Q96HU1 749 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 MLH1P40692 756 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 TRIM65Q6PJ69 517 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 VPS37AQ8NEZ2 397 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 CBWD1Q9BRT8 395 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 MED14O60244 1454 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 SPATA31A1Q5TZJ5 1347 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 NDUFB5O43674 189 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 EFEMP1Q12805 493 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 TP53BP2Q13625 1128 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 VPS72Q15906 364 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 TMEM245Q9H330 911 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 IARS2Q9NSE4 1012 aaKnown RBP11.36□□□□□ -0.59
VAPB-204ENST00000475243 RIC8BQ9NVN3 520 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 GPR75-ASB3A0A0A6YYF3 556 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 GPR182O15218 404 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 GRIN3BO60391 1043 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 SOAT2O75908 522 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 ANXA9O76027 345 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 AGAP9Q5VTM2 703 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 SLFN11Q7Z7L1 901 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 OOSP2Q86WS3 158 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 CCDC60Q8IWA6 550 aaPredicted RBP11.36□□□□□ -0.59
VAPB-204ENST00000475243 ADGRF2Q8IZF7 708 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 A0A087X0T9 212 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 FAM228BP0C875 321 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 PCNAP12004 261 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 PNPLA4P41247 253 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 AGBL2Q5U5Z8 902 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 STYK1Q6J9G0 422 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 EPS8L3Q8TE67 593 aaKnown RBP11.36□□□□□ -0.59
VAPB-204ENST00000475243 DDI1Q8WTU0 396 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 PACSIN1Q9BY11 444 aa11.36□□□□□ -0.59
VAPB-204ENST00000475243 A0A1W2PQJ5 194 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 C16orf96A6NNT2 1141 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 DARSP14868 501 aaKnown RBP11.35□□□□□ -0.59
VAPB-204ENST00000475243 TCF3P15923 654 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 HSD17B3P37058 310 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 TMEM132BQ14DG7 1078 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 ALFQ53S48 1182 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 DENND1BQ6P3S1 775 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 NSL1Q96IY1 281 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 MAGED4Q96JG8 741 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 TMEM121Q9BTD3 319 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 GTF2A1LQ9UNN4 478 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 NFIBO00712 420 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 H2AFYO75367 372 aaKnown RBP11.35□□□□□ -0.59
VAPB-204ENST00000475243 KRT16P08779 473 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 KLC1Q07866 573 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 AASDHQ4L235 1098 aaPredicted RBP11.35□□□□□ -0.59
VAPB-204ENST00000475243 P3H2Q8IVL5 708 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 UNC45BQ8IWX7 931 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 ZSWIM2Q8NEG5 633 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 ISCUQ9H1K1 167 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 IMPAD1Q9NX62 359 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 TUBE1Q9UJT0 475 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 HPS5Q9UPZ3 1129 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
VAPB-204ENST00000475243 GPC1P35052 558 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 OLFML2BQ68BL8 750 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 SCN3BQ9NY72 215 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 POLLQ9UGP5 575 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 SERPINI2O75830 405 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 STAG3L1P0CL83 205 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 CYP11B2P19099 503 aa11.35□□□□□ -0.59
VAPB-204ENST00000475243 CENPCQ03188 943 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms