RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 GLRA4Q5JXX5 417 aa22.84■■□□□ 1.25
CCM2-206ENST00000474617 OLFML1Q6UWY5 402 aa22.84■■□□□ 1.25
CCM2-206ENST00000474617 PCGF5Q86SE9 256 aa22.84■■□□□ 1.25
CCM2-206ENST00000474617 ALLCQ8N6M5 410 aa22.84■■□□□ 1.25
CCM2-206ENST00000474617 ATG4AQ8WYN0 398 aa22.84■■□□□ 1.25
CCM2-206ENST00000474617 RAPGEF5Q92565 580 aa22.84■■□□□ 1.25
CCM2-206ENST00000474617 PHACTR1Q9C0D0 580 aa22.84■■□□□ 1.25
CCM2-206ENST00000474617 UBN1Q9NPG3 1134 aa22.84■■□□□ 1.25
CCM2-206ENST00000474617 XPNPEP3Q9NQH7 507 aa22.84■■□□□ 1.25
CCM2-206ENST00000474617 ANAPC5Q9UJX4 755 aa22.84■■□□□ 1.25
CCM2-206ENST00000474617 SCN1AP35498 2009 aa22.84■■□□□ 1.25
CCM2-206ENST00000474617 TRIP12Q14669 1992 aaPredicted RBP22.84■■□□□ 1.25
CCM2-206ENST00000474617 TRUB2O95900 331 aaKnown RBP22.83■■□□□ 1.25
CCM2-206ENST00000474617 IVLP07476 585 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 PDGFRAP16234 1089 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 KLRC2P26717 231 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 MIPP30301 263 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 RPL9P32969 192 aaKnown RBP22.83■■□□□ 1.25
CCM2-206ENST00000474617 GYS2P54840 703 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 DAB2IPQ5VWQ8 1189 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 FAM183BPQ6ZVS7 135 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 ADGRF2Q8IZF7 708 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 KLHDC9Q8NEP7 349 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 KBTBD7Q8WVZ9 684 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 PGM2Q96G03 612 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 PRDM16Q9HAZ2 1276 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 PCDH9Q9HC56 1237 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 FAM105AQ9NUU6 356 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 ST3GAL5Q9UNP4 418 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 ZNF148Q9UQR1 794 aa22.83■■□□□ 1.25
CCM2-206ENST00000474617 MYADML2A6NDP7 307 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 PPEF2O14830 753 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 PRPSAP2O60256 369 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 NR1D1P20393 614 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 SDC4P31431 198 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 PTPN9P43378 593 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 LILRA4P59901 499 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 IRX5P78411 483 aaPredicted RBP22.82■■□□□ 1.24
CCM2-206ENST00000474617 MGAT3Q09327 533 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 OASLQ15646 514 aaKnown RBP22.82■■□□□ 1.24
CCM2-206ENST00000474617 C6orf118Q5T5N4 469 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 CXCL17Q6UXB2 119 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 SLC26A9Q7LBE3 791 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 MRPL10Q7Z7H8 261 aaKnown RBP22.82■■□□□ 1.24
CCM2-206ENST00000474617 TTC30AQ86WT1 665 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 KCTD6Q8NC69 237 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 CAPS2Q9BXY5 557 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 PI4K2BG5E9Z4 385 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 APOC4-APOC2K7ER74 178 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 ZNF623O75123 536 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 ENDOD1O94919 500 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 APOC2P02655 101 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 KRT71Q3SY84 523 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 ATP13A4Q4VNC1 1196 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 GDF6Q6KF10 455 aaPredicted RBP22.82■■□□□ 1.24
CCM2-206ENST00000474617 ARFGAP1Q8N6T3 406 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 C12orf29Q8N999 325 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 SLC35B2Q8TB61 432 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 RXFP2Q8WXD0 754 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 TJP2Q9UDY2 1190 aa22.82■■□□□ 1.24
CCM2-206ENST00000474617 TOMM70O94826 608 aa22.81■■□□□ 1.24
CCM2-206ENST00000474617 GNRH1P01148 92 aa22.81■■□□□ 1.24
CCM2-206ENST00000474617 TCF4P15884 667 aa22.81■■□□□ 1.24
CCM2-206ENST00000474617 LHX1P48742 406 aa22.81■■□□□ 1.24
CCM2-206ENST00000474617 CACNB2Q08289 660 aaPredicted RBP22.81■■□□□ 1.24
CCM2-206ENST00000474617 KAZNQ674X7 775 aa22.81■■□□□ 1.24
CCM2-206ENST00000474617 PMF1Q6P1K2 205 aa22.81■■□□□ 1.24
CCM2-206ENST00000474617 HNRNPABQ99729 332 aaKnown RBP22.81■■□□□ 1.24
CCM2-206ENST00000474617 RNF39Q9H2S5 420 aa22.81■■□□□ 1.24
CCM2-206ENST00000474617 ZWILCHQ9H900 591 aa22.81■■□□□ 1.24
CCM2-206ENST00000474617 CNOT10Q9H9A5 744 aaKnown RBP22.81■■□□□ 1.24
CCM2-206ENST00000474617 KLK14Q9P0G3 267 aa22.81■■□□□ 1.24
CCM2-206ENST00000474617 GABRQQ9UN88 632 aa22.81■■□□□ 1.24
CCM2-206ENST00000474617 ARHGEF37A1IGU5 675 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 XPO1O14980 1071 aaKnown RBP22.8■■□□□ 1.24
CCM2-206ENST00000474617 MDM4O15151 490 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 RIPK2O43353 540 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 THP07101 528 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 KRT10P13645 584 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 IL1R2P27930 398 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 ITGA8P53708 1063 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 SP3Q02447 781 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 PRKCZQ05513 592 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 PDE4CQ08493 712 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 PTK7Q13308 1070 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 MORF4L2Q15014 288 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 EFHC1Q5JVL4 640 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 EMC1Q8N766 993 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 PGBD4Q96DM1 585 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 MAK16Q9BXY0 300 aaKnown RBP22.8■■□□□ 1.24
CCM2-206ENST00000474617 CWC15Q9P013 229 aaKnown RBP22.8■■□□□ 1.24
CCM2-206ENST00000474617 DNPEPQ9ULA0 475 aa22.8■■□□□ 1.24
CCM2-206ENST00000474617 PTGESO14684 152 aa22.79■■□□□ 1.24
CCM2-206ENST00000474617 PGK1P00558 417 aa22.79■■□□□ 1.24
CCM2-206ENST00000474617 FAM26DQ5JW98 314 aa22.79■■□□□ 1.24
CCM2-206ENST00000474617 HIBCHQ6NVY1 386 aaPredicted RBP22.79■■□□□ 1.24
CCM2-206ENST00000474617 ZCCHC9Q8N567 271 aaKnown RBP22.79■■□□□ 1.24
CCM2-206ENST00000474617 B3GALNT2Q8NCR0 500 aa22.79■■□□□ 1.24
CCM2-206ENST00000474617 TTC25Q96NG3 672 aa22.79■■□□□ 1.24
CCM2-206ENST00000474617 CXCL16Q9H2A7 254 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms