RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 MGAT3Q09327 533 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 SREBF2Q12772 1141 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 CBLBQ13191 982 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 CRHR2Q13324 411 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 SV2CQ496J9 727 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 GLRA4Q5JXX5 417 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 KAZNQ674X7 775 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 PMF1Q6P1K2 205 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 ACOT1Q86TX2 421 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 SESTD1Q86VW0 696 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 ZCCHC9Q8N567 271 aaKnown RBP10.3□□□□□ -0.76
USP39-214ENST00000474572 C12orf29Q8N999 325 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 GLIS1Q8NBF1 620 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 TEKT4Q8WW24 435 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 RXFP2Q8WXD0 754 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 CENPTQ96BT3 561 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 PIWIL1Q96J94 861 aaKnown RBP10.3□□□□□ -0.76
USP39-214ENST00000474572 MTG1Q9BT17 334 aaPredicted RBP10.3□□□□□ -0.76
USP39-214ENST00000474572 C11orf84Q9BUA3 381 aaPredicted RBP10.3□□□□□ -0.76
USP39-214ENST00000474572 TRIM6Q9C030 488 aaPredicted RBP10.3□□□□□ -0.76
USP39-214ENST00000474572 ADAM7Q9H2U9 754 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 SYNCQ9H7C4 482 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 CNOT10Q9H9A5 744 aaKnown RBP10.3□□□□□ -0.76
USP39-214ENST00000474572 NINJ2Q9NZG7 142 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 CWC15Q9P013 229 aaKnown RBP10.3□□□□□ -0.76
USP39-214ENST00000474572 GTF2IRD1Q9UHL9 959 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 USP18Q9UMW8 372 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 GINS2Q9Y248 185 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 IPPQ9Y573 584 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 TRPV2Q9Y5S1 764 aa10.3□□□□□ -0.76
USP39-214ENST00000474572 DCDC2CA8MYV0 355 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 KPNA7A9QM74 516 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 APOC4-APOC2K7ER74 178 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 TULP2O00295 520 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 PTGESO14684 152 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 SPTLC1O15269 473 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 PAPSS1O43252 624 aaPredicted RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 CA12O43570 354 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 APOC2P02655 101 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 RPLP2P05387 115 aaKnown RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 WARSP23381 471 aaKnown RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 ADCY8P40145 1251 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 PTPN9P43378 593 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 MMP13P45452 471 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 BCAT1P54687 386 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 SNX16P57768 344 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 MAGOHP61326 146 aaKnown RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 MRPS6P82932 125 aaKnown RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 OTUD4Q01804 1114 aaKnown RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 PDE4CQ08493 712 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 BST2Q10589 180 aaKnown RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 AUHQ13825 339 aaKnown RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 MORF4L2Q15014 288 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 NOMO1Q15155 1222 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 TRIP13Q15645 432 aaPredicted RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 PTGISQ16647 500 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 CCDC14Q49A88 953 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 ODF2Q5BJF6 829 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 DNAJC21Q5F1R6 531 aaKnown RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 RNASEH2BQ5TBB1 312 aaKnown RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 OR6B2Q6IFH4 312 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 SLC26A9Q7LBE3 791 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 TOP6BLQ8N6T0 577 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 C7orf31Q8N865 590 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 ANKRD52Q8NB46 1076 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 ARRDC4Q8NCT1 418 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 ACTL9Q8TC94 416 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 PPP1R13LQ8WUF5 828 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 ACSF2Q96CM8 615 aaPredicted RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 HHIPL1Q96JK4 782 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 HSFY1Q96LI6 401 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 SERPINB12Q96P63 405 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 PPP1R10Q96QC0 940 aaKnown RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 TBCBQ99426 244 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 FAM118BQ9BPY3 351 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 RNF39Q9H2S5 420 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 ZWILCHQ9H900 591 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 RSAD1Q9HA92 442 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 EURLQ9NYK6 297 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 HESX1Q9UBX0 185 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 SHOC2Q9UQ13 582 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 ZNF148Q9UQR1 794 aa10.29□□□□□ -0.76
USP39-214ENST00000474572 FARP1Q9Y4F1 1045 aaPredicted RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.29□□□□□ -0.76
USP39-214ENST00000474572 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.28□□□□□ -0.76
USP39-214ENST00000474572 A8MXQ7 604 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 SMAPO00193 183 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 MDM4O15151 490 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 CST8O60676 142 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 ADAMTS4O75173 837 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 CD48P09326 243 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 PDGFRAP16234 1089 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 ACADSBP45954 432 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 GUCY1A3Q02108 690 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 PDK2Q15119 407 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 SMTNL2Q2TAL5 461 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 P3H1Q32P28 736 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 ZFYVE27Q5T4F4 411 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 FOXR1Q6PIV2 292 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 OSTM1Q86WC4 334 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms