RNA–Protein interactions for RNA: ENST00000474339.1

RNF25-205, Transcript of ring finger protein 25, human

TSL 2

Gene RNF25, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF25-205	ENST00000474339	TRPC7	Q9HCX4	862 aa		12.81	□□□□□ -0.36
RNF25-205	ENST00000474339	COMMD8	Q9NX08	183 aa		12.81	□□□□□ -0.36
RNF25-205	ENST00000474339	HOOK1	Q9UJC3	728 aa	Known RBP	12.81	□□□□□ -0.36
RNF25-205	ENST00000474339	ARHGAP26	Q9UNA1	814 aa		12.81	□□□□□ -0.36
RNF25-205	ENST00000474339	CCL26	Q9Y258	94 aa		12.81	□□□□□ -0.36
RNF25-205	ENST00000474339	TICRR	Q7Z2Z1	1910 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339		F8VP50	259 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	TRDMT1	O14717	391 aa	Known RBP	12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	NR2F2	P24468	414 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	HOXA6	P31267	233 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	PSMC2	P35998	433 aa	Known RBP	12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	TNK2	Q07912	1038 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	CCIN	Q13939	588 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	PON2	Q15165	354 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	EDRF1	Q3B7T1	1238 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	FBXO43	Q4G163	708 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	SV2A	Q7L0J3	742 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	NUP93	Q8N1F7	819 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	CCDC150	Q8NCX0	1101 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	STKLD1	Q8NE28	680 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	FAXDC2	Q96IV6	333 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	HINFP	Q9BQA5	517 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	EPC1	Q9H2F5	836 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	EBF3	Q9H4W6	596 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	DUS2	Q9NX74	493 aa	Known RBP	12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	GCNT4	Q9P109	453 aa		12.8	□□□□□ -0.36
RNF25-205	ENST00000474339	COL4A2	P08572	1712 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	F5	P12259	2224 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	CACNA1I	Q9P0X4	2223 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	ZNF840P	A6NDX5	716 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	SLC9A3R1	O14745	358 aa	Predicted RBP	12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	STX10	O60499	249 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	TADA3	O75528	432 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	ASS1	P00966	412 aa	Known RBP	12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	DRD1	P21728	446 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	YWHAQ	P27348	245 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	GTF2H1	P32780	548 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	SOX9	P48436	509 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	IFNAR2	P48551	515 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	SLC7A9	P82251	487 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	ADAM9	Q13443	819 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	ZNF77	Q15935	545 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	TXNDC11	Q6PKC3	985 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	DDX42	Q86XP3	938 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	CRYBG2	Q8N1P7	616 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	TTC39C	Q8N584	583 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	SUMF1	Q8NBK3	374 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	TTC8	Q8TAM2	541 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	PLEKHO2	Q8TD55	490 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	SMARCD1	Q96GM5	515 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	GSDMA	Q96QA5	445 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	CYP2S1	Q96SQ9	504 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	MED10	Q9BTT4	135 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	B3GNT5	Q9BYG0	378 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	DPEP3	Q9H4B8	488 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	FAM124B	Q9H5Z6	455 aa	Predicted RBP	12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	CYP3A43	Q9HB55	503 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	DMAP1	Q9NPF5	467 aa	Predicted RBP	12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	HPS4	Q9NQG7	708 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	RAB23	Q9ULC3	237 aa		12.79	□□□□□ -0.36
RNF25-205	ENST00000474339	PATJ	Q8NI35	1801 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	PTPRZ1	P23471	2315 aa	Predicted RBP	12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	MYO15A	Q9UKN7	3530 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	COL4A3	Q01955	1670 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	C2orf78	A6NCI8	922 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	SMC2	O95347	1197 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	VNN1	O95497	513 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	NFATC1	O95644	943 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	PRR29	P0C7W0	189 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	TDGF1	P13385	188 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	PIK3CA	P42336	1068 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	CDH8	P55286	799 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	MCCD1	P59942	119 aa	Predicted RBP	12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	DLG4	P78352	724 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	FOXK2	Q01167	660 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	TAF10	Q12962	218 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	USP4	Q13107	963 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	CCDC142	Q17RM4	750 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	TMEM196	Q5HYL7	178 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	TSSK4	Q6SA08	328 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	FAM186B	Q8IYM0	893 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	SH3RF2	Q8TEC5	729 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	SLC22A12	Q96S37	553 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	ZNF518B	Q9C0D4	1074 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	FBXO44	Q9H4M3	255 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	SMYD3	Q9H7B4	428 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	ECT2	Q9H8V3	914 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	NCDN	Q9UBB6	729 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	MAPK8IP1	Q9UQF2	711 aa		12.78	□□□□□ -0.36
RNF25-205	ENST00000474339	CFAP54	Q96N23	3096 aa		12.77	□□□□□ -0.37
RNF25-205	ENST00000474339	RIF1	Q5UIP0	2472 aa	Known RBP	12.77	□□□□□ -0.37
RNF25-205	ENST00000474339	CCDC163	A0A0D9SF12	145 aa		12.77	□□□□□ -0.37
RNF25-205	ENST00000474339	CETN3	O15182	167 aa		12.77	□□□□□ -0.37
RNF25-205	ENST00000474339	AKAP3	O75969	853 aa		12.77	□□□□□ -0.37
RNF25-205	ENST00000474339	OLFM2	O95897	454 aa		12.77	□□□□□ -0.37
RNF25-205	ENST00000474339	ABL1	P00519	1130 aa		12.77	□□□□□ -0.37
RNF25-205	ENST00000474339	HLA-DRA	P01903	254 aa		12.77	□□□□□ -0.37
RNF25-205	ENST00000474339	SDHB	P21912	280 aa		12.77	□□□□□ -0.37
RNF25-205	ENST00000474339	GJA4	P35212	333 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms