RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ZSCAN18Q8TBC5 510 aaPredicted RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 PIGOQ8TEQ8 1089 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 U2AF1L4Q8WU68 220 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 CACTINQ8WUQ7 758 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 SLC5A11Q8WWX8 675 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 HERVK_113Q902F9 699 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ATOH1Q92858 354 aaPredicted RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 MSANTD3Q96H12 275 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 TRIM47Q96LD4 638 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 SMC6Q96SB8 1091 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 LBHD1Q9BQE6 289 aaPredicted RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 KRT23Q9C075 422 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 FAM204AQ9H8W3 233 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 RTEL1Q9NZ71 1219 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 UBP1Q9NZI7 540 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 PCDHB11Q9Y5F2 797 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ADGRB1O14514 1584 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 KIF1BO60333 1816 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 BCORQ6W2J9 1755 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 CCDC78A2IDD5 438 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 LRRD1A4D1F6 860 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 PI4KAP2A4QPH2 592 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 RPS6KA4O75676 772 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 KRT14P02533 472 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 CSTBP04080 98 aaKnown RBP6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 RFC1P35251 1148 aaPredicted RBP6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 CRKP46108 304 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 TUFMP49411 452 aaKnown RBP6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 CASP5P51878 434 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 NRG1Q02297 640 aaPredicted RBP6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 HSPA14Q0VDF9 509 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 KCNAB2Q13303 367 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 HNRNPDQ14103 355 aaKnown RBP6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 GRIN2CQ14957 1233 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 NCF4Q15080 339 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 PCBP1Q15365 356 aaKnown RBP eCLIP6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 TAF5Q15542 800 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 PFKFB3Q16875 520 aaPredicted RBP6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 USH1GQ495M9 461 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 SLC39A12Q504Y0 691 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 HSP90AA5PQ58FG0 334 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 IGSF11Q5DX21 431 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 ZNF574Q6ZN55 896 aaPredicted RBP6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 BEND4Q6ZU67 534 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 CAGE1Q8TC20 777 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 RRP36Q96EU6 259 aaKnown RBP6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 MRGPRX2Q96LB1 330 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 CGREF1Q99674 301 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 LLPHQ9BRT6 129 aaKnown RBP6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 SPXQ9BT56 116 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 SPATA9Q9BWV2 254 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 NUSAP1Q9BXS6 441 aaKnown RBP6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 TOR4AQ9NXH8 423 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 ADD3Q9UEY8 706 aaKnown RBP6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 RPS6KA6Q9UK32 745 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 KDM3BQ7LBC6 1761 aa6.4□□□□□ -1.38
SMARCE1-208ENST00000474246 KIF24Q5T7B8 1368 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 CDHR2Q9BYE9 1310 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 NCF1BA6NI72 391 aaPredicted RBP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 LRRIQ3A6PVS8 624 aaPredicted RBP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 NCF1CA8MVU1 366 aaPredicted RBP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 GOLGA8MH3BSY2 632 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 NEMP1O14524 444 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 BUB1O43683 1085 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 ZC3H11AO75152 810 aaKnown RBP eCLIP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 KLHL18O94889 574 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 CAMTA2O94983 1202 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 KLHL2O95198 593 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 MT-CO1P00395 513 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 RB1P06400 928 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 MYBP10242 640 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 CCL5P13501 91 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 PTPN2P17706 415 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 FSHRP23945 695 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 EEF1DP29692 281 aaKnown RBP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 ACAA2P42765 397 aaKnown RBP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 CBX5P45973 191 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 OR1G1P47890 313 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 HNRNPH2P55795 449 aaKnown RBP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 RIPPLY3P57055 190 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 RIPK1Q13546 671 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 CUL1Q13616 776 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 ERV3-1Q14264 604 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 PTPAQ15257 358 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 PCBP2Q15366 365 aaKnown RBP eCLIP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 ZNF124Q15973 351 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 HS1BP3Q53T59 392 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 INTS6LQ5JSJ4 861 aaKnown RBP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 SPRYD7Q5W111 196 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 FBXL19Q6PCT2 694 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 PIWIL3Q7Z3Z3 882 aaKnown RBP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 LRRTM4Q86VH4 590 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 GATAD2AQ86YP4 633 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 SLC22A9Q8IVM8 553 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 CMTR2Q8IYT2 770 aaKnown RBP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 TTC5Q8N0Z6 440 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 ADAMTS15Q8TE58 950 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 NANOS1Q8WY41 292 aaKnown RBP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 USP7Q93009 1102 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms