RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 ACOT1Q86TX2 421 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 C1orf210Q8IVY1 113 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 ZC3H3Q8IXZ2 948 aaKnown RBP19.08■□□□□ 0.64
UPF3A-203ENST00000474056 ZNF687Q8N1G0 1237 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 FAM3CQ92520 227 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 TNIP3Q96KP6 325 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 CYP2S1Q96SQ9 504 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 NELL2Q99435 816 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 TSG101Q99816 390 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 TTLL2Q9BWV7 592 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 IMPG2Q9BZV3 1241 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 KIF9Q9HAQ2 790 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 TDP1Q9NUW8 608 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 USP34Q70CQ2 3546 aa19.07■□□□□ 0.64
UPF3A-203ENST00000474056 C2orf78A6NCI8 922 aa19.07■□□□□ 0.64
UPF3A-203ENST00000474056 CD44P16070 742 aaKnown RBP19.07■□□□□ 0.64
UPF3A-203ENST00000474056 CCNE1P24864 410 aa19.07■□□□□ 0.64
UPF3A-203ENST00000474056 NBL1P41271 181 aa19.07■□□□□ 0.64
UPF3A-203ENST00000474056 PLCB2Q00722 1185 aa19.07■□□□□ 0.64
UPF3A-203ENST00000474056 KRT39Q6A163 491 aa19.07■□□□□ 0.64
UPF3A-203ENST00000474056 CLDN23Q96B33 292 aa19.07■□□□□ 0.64
UPF3A-203ENST00000474056 TWNKQ96RR1 684 aa19.07■□□□□ 0.64
UPF3A-203ENST00000474056 MED10Q9BTT4 135 aa19.07■□□□□ 0.64
UPF3A-203ENST00000474056 GCNT4Q9P109 453 aa19.07■□□□□ 0.64
UPF3A-203ENST00000474056 MYOFQ9NZM1 2061 aa19.07■□□□□ 0.64
UPF3A-203ENST00000474056 ATP8B3O60423 1300 aa19.06■□□□□ 0.64
UPF3A-203ENST00000474056 NCAM2O15394 837 aa19.06■□□□□ 0.64
UPF3A-203ENST00000474056 CCDC130P13994 396 aa19.06■□□□□ 0.64
UPF3A-203ENST00000474056 GTF2H1P32780 548 aa19.06■□□□□ 0.64
UPF3A-203ENST00000474056 MAGEA9P43362 315 aa19.06■□□□□ 0.64
UPF3A-203ENST00000474056 MXI1P50539 228 aa19.06■□□□□ 0.64
UPF3A-203ENST00000474056 KPNA1P52294 538 aaPredicted RBP19.06■□□□□ 0.64
UPF3A-203ENST00000474056 FKBP3Q00688 224 aaKnown RBP19.06■□□□□ 0.64
UPF3A-203ENST00000474056 IFRD2Q12894 506 aaPredicted RBP19.06■□□□□ 0.64
UPF3A-203ENST00000474056 ZNF268Q14587 947 aaPredicted RBP19.06■□□□□ 0.64
UPF3A-203ENST00000474056 TRIM68Q6AZZ1 485 aa19.06■□□□□ 0.64
UPF3A-203ENST00000474056 TXNDC11Q6PKC3 985 aa19.06■□□□□ 0.64
UPF3A-203ENST00000474056 UNC93AQ86WB7 457 aa19.06■□□□□ 0.64
UPF3A-203ENST00000474056 FUKQ8N0W3 1084 aa19.06■□□□□ 0.64
UPF3A-203ENST00000474056 ARL14EPQ8N8R7 260 aaPredicted RBP19.06■□□□□ 0.64
UPF3A-203ENST00000474056 SEMA4DQ92854 862 aa19.06■□□□□ 0.64
UPF3A-203ENST00000474056 KCNK16Q96T55 309 aa19.06■□□□□ 0.64
UPF3A-203ENST00000474056 GTPBP4Q9BZE4 634 aaKnown RBP19.06■□□□□ 0.64
UPF3A-203ENST00000474056 C8orf33Q9H7E9 229 aaPredicted RBP19.06■□□□□ 0.64
UPF3A-203ENST00000474056 SPATA6Q9NWH7 488 aaPredicted RBP19.06■□□□□ 0.64
UPF3A-203ENST00000474056 TRAV19A0A0A6YYK7 116 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 SPECC1L-ADORA2AF8WAN1 911 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 SLC16A3O15427 465 aaKnown RBP19.05■□□□□ 0.64
UPF3A-203ENST00000474056 CKMP06732 381 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 USP17L7P0C7H9 530 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 BMP6P22004 513 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 CTHP32929 405 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 RPS9P46781 194 aaKnown RBP19.05■□□□□ 0.64
UPF3A-203ENST00000474056 MLLT6P55198 1093 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-203ENST00000474056 LRRC63Q05C16 580 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 INCA1Q0VD86 236 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 USP4Q13107 963 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 ZNF77Q15935 545 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 DCAF17Q5H9S7 520 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-203ENST00000474056 TCERG1LQ5VWI1 586 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 FRMD5Q7Z6J6 570 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 MAML2Q8IZL2 1156 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-203ENST00000474056 CRYBG2Q8N1P7 616 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 C12orf29Q8N999 325 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 SMARCD1Q96GM5 515 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 FAM83CQ9BQN1 747 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 NIF3L1Q9GZT8 377 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 HPS4Q9NQG7 708 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 GKN1Q9NS71 199 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 KRT82Q9NSB4 513 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 FAM49BQ9NUQ9 324 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 THG1LQ9NWX6 298 aaKnown RBP19.05■□□□□ 0.64
UPF3A-203ENST00000474056 TRPM5Q9NZQ8 1165 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 CHMP5Q9NZZ3 219 aa19.05■□□□□ 0.64
UPF3A-203ENST00000474056 VPS13AQ96RL7 3174 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 PROB1E7EW31 1015 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 PSMA7O14818 248 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 AP1G2O75843 785 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 TAF10Q12962 218 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 STIM1Q13586 685 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 MTF1Q14872 753 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 CBWD6Q4V339 395 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 WDR44Q5JSH3 913 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 CBWD3Q5JTY5 395 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 CBWD5Q5RIA9 395 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 NUP93Q8N1F7 819 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 FBXL13Q8NEE6 735 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 TTC16Q8NEE8 873 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 ZMIZ2Q8NF64 920 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 SLC2A14Q8TDB8 520 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 MSANTD3Q96H12 275 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 SMOQ99835 787 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 EBF3Q9H4W6 596 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 CYP3A43Q9HB55 503 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 DMAP1Q9NPF5 467 aaPredicted RBP19.04■□□□□ 0.64
UPF3A-203ENST00000474056 EHD2Q9NZN4 543 aa19.04■□□□□ 0.64
UPF3A-203ENST00000474056 ZNF840PA6NDX5 716 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 BIN1O00499 593 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 LAMTOR5O43504 91 aa19.03■□□□□ 0.64
UPF3A-203ENST00000474056 STX10O60499 249 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms