RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 P2RY2P41231 377 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 PI4KAP42356 2102 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 PTGER3P43115 390 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 MAPK8P45983 427 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 DHPSP49366 369 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TAF6P49848 677 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 NEK4P51957 841 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 ZNF131P52739 623 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 SEC13P55735 322 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 SIM1P81133 766 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TSPY1Q01534 308 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 LMAN2Q12907 356 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 PSMD2Q13200 908 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 SEMA3BQ13214 749 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 GNL2Q13823 731 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 ZRSR1Q15695 479 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 CRY1Q16526 586 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 NFE2Q16621 373 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 DDR2Q16832 855 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 CCDC142Q17RM4 750 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TMEM119Q4V9L6 283 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 ZC2HC1CQ53FD0 456 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 C2orf27AQ580R0 203 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TRIM61Q5EBN2 209 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 BLOC1S3Q6QNY0 202 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 DTHD1Q6ZMT9 781 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 PROSER1Q86XN7 944 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 CCDC83Q8IWF9 413 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 SFTPA1Q8IWL2 248 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 CD302Q8IX05 232 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 EFCAB13Q8IY85 973 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 DCP1BQ8IZD4 617 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 THEM5Q8N1Q8 247 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TTC16Q8NEE8 873 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 CCDC26Q8TAB7 109 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 SH3RF2Q8TEC5 729 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 PIGKQ92643 395 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TRMT2BQ96GJ1 504 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 FNBP1Q96RU3 617 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 FIZ1Q96SL8 496 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 CYP2S1Q96SQ9 504 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 PKMYT1Q99640 499 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 REEP2Q9BRK0 252 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 PI4K2AQ9BTU6 479 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 NUSAP1Q9BXS6 441 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 LINC00597Q9H2U6 94 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 SLC32A1Q9H598 525 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 ASB7Q9H672 318 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TRPC7Q9HCX4 862 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 ABCB6Q9NP58 842 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TMEM74BQ9NUR3 256 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 DPP3Q9NY33 737 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 GCNT4Q9P109 453 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 UXTQ9UBK9 157 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 ODF2LQ9ULJ1 636 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 MSRB2Q9Y3D2 182 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 MYH11P35749 1972 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 ZNF638Q14966 1978 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 PTPRDP23468 1912 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TNRC6BQ9UPQ9 1833 aaKnown RBP5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 FAM221BA6H8Z2 402 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 C2orf78A6NCI8 922 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 CAPN8A6NHC0 703 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 KPNA7A9QM74 516 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 TISP43B9A030 160 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 ANKRD63C9JTQ0 380 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 K7ENM7 598 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 ALDH1A2O94788 518 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 NFATC1O95644 943 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 CYP17A1P05093 508 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 CYP2F1P24903 491 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 HOXD12P35452 270 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 ACOT2P49753 483 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 RPL10AP62906 217 aaKnown RBP5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 FAM193AP78312 1265 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 MRPS21P82921 87 aaKnown RBP5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 HMGN5P82970 282 aaKnown RBP5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 ZXDBP98169 803 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 ATP2C1P98194 919 aaPredicted RBP5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 C19orf57Q0VDD7 668 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 MESP2Q0VG99 397 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 NR1H3Q13133 447 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 MAP7D1Q3KQU3 841 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 SV2CQ496J9 727 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 INTS6LQ5JSJ4 861 aaKnown RBP5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 PEAR1Q5VY43 1037 aaPredicted RBP5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 SLC23A3Q6PIS1 610 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 ARMCX6Q7L4S7 300 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 LPCAT2Q7L5N7 544 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 RAB44Q7Z6P3 723 aaPredicted RBP5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 SYT12Q8IV01 421 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 TMEFF1Q8IYR6 380 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 PDCL2Q8N4E4 241 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 CCDC33Q8N5R6 958 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 KCTD17Q8N5Z5 321 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 ALLCQ8N6M5 410 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 ARL14EPQ8N8R7 260 aaPredicted RBP5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 IL17RCQ8NAC3 791 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 TXNDC5Q8NBS9 432 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms