RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 DLDP09622 509 aaKnown RBP6.39□□□□□ -1.39
HERC4-209ENST00000473533 KRT10P13645 584 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 EFNA5P52803 228 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 EIF3EP60228 445 aaKnown RBP6.39□□□□□ -1.39
HERC4-209ENST00000473533 TMPRSS15P98073 1019 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 BIRC2Q13490 618 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 TRPC3Q13507 836 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 THOC5Q13769 683 aaKnown RBP6.39□□□□□ -1.39
HERC4-209ENST00000473533 TAZQ16635 292 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 ACSBG2Q5FVE4 666 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 RASIP1Q5U651 963 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 TDRD10Q5VZ19 366 aaKnown RBP6.39□□□□□ -1.39
HERC4-209ENST00000473533 ZPBP2Q6X784 338 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 PPP1R14CQ8TAE6 165 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 ACTL9Q8TC94 416 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.39□□□□□ -1.39
HERC4-209ENST00000473533 ACMSDQ8TDX5 336 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 SPOCK2Q92563 424 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 ZBTB10Q96DT7 871 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 C8orf37Q96NL8 207 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 RMDN3Q96TC7 470 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 PDCD2LQ9BRP1 358 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 TMEM121Q9BTD3 319 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 ASCC2Q9H1I8 757 aaPredicted RBP6.39□□□□□ -1.39
HERC4-209ENST00000473533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.39□□□□□ -1.391e-6■■■■■ 140.1
HERC4-209ENST00000473533 HOMER2Q9NSB8 354 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 TAS2R1Q9NYW7 299 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 THEGQ9P2T0 379 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 ZNRF3Q9ULT6 936 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 SOX13Q9UN79 622 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 BCS1LQ9Y276 419 aa6.39□□□□□ -1.39
HERC4-209ENST00000473533 ZNFX1Q9P2E3 1918 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 CST8O60676 142 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 STK10O94804 968 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 MYCLP12524 364 aaPredicted RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 GM2AP17900 193 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 CRABP2P29373 138 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 PSMC4P43686 418 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 RAB27AP51159 221 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 ACTR3P61158 418 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 BASP1P80723 227 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 DEUP1Q05D60 604 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 ITGA9Q13797 1035 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 C1orf146Q5VVC0 180 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 OR52E8Q6IFG1 317 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 CHADLQ6NUI6 762 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 SLC39A4Q6P5W5 647 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 POTEAQ6S8J7 498 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 CAPN12Q6ZSI9 719 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 AMIGO3Q86WK7 504 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 PASD1Q8IV76 773 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 KCTD6Q8NC69 237 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 RFWD2Q8NHY2 731 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 ACER1Q8TDN7 264 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 PPP4R1Q8TF05 950 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 MZB1Q8WU39 189 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 CLEC4DQ8WXI8 215 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 GATA6Q92908 595 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 MIPEPQ99797 713 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 SYT15Q9BQS2 421 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 PRDM16Q9HAZ2 1276 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 PXMP2Q9NR77 195 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 PPARGC1AQ9UBK2 798 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 GABBR1Q9UBS5 961 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 SEPT9Q9UHD8 586 aaPredicted RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 TESPA1A2RU30 521 aaPredicted RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 WDR91A4D1P6 747 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 GAS2O43903 313 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 KRT36O76013 467 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 KRT3P12035 628 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 P4HA1P13674 534 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 ANPEPP15144 967 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 KDELR1P24390 212 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 RPL22P35268 128 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 CCNFP41002 786 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 ETV4P43268 484 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 FASTKD3Q14CZ7 662 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 FSCBQ5H9T9 825 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 PLA2G4FQ68DD2 849 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 ACAD11Q709F0 780 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 ANO5Q75V66 913 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 CCNJLQ8IV13 435 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 NUDCD3Q8IVD9 361 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 SLC7A3Q8WY07 619 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 GFM2Q969S9 779 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 MRRFQ96E11 262 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 FAM111AQ96PZ2 611 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 ZDHHC7Q9NXF8 308 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 USP21Q9UK80 565 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 GRID1Q9ULK0 1009 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 APOBEC2Q9Y235 224 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 SSC5DA1L4H1 1573 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 H0YIN7 160 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 CREB3O43889 395 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 ASS1P00966 412 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 TNNC2P02585 160 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 ZSCAN5DPP0CG00 497 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 EIF2AK2P19525 551 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 TGM2P21980 687 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 OSBPP22059 807 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms