RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 ABCD1P33897 745 aa14.89□□□□□ -0.03
NHLRC3-204ENST00000473371 ZNF132P52740 706 aa14.89□□□□□ -0.03
NHLRC3-204ENST00000473371 KBTBD12Q3ZCT8 623 aa14.89□□□□□ -0.03
NHLRC3-204ENST00000473371 SCARA3Q6AZY7 606 aa14.89□□□□□ -0.03
NHLRC3-204ENST00000473371 BBS12Q6ZW61 710 aa14.89□□□□□ -0.03
NHLRC3-204ENST00000473371 FAM71DQ8N9W8 422 aa14.89□□□□□ -0.03
NHLRC3-204ENST00000473371 FRMD8P1Q9BZ68 369 aaPredicted RBP14.89□□□□□ -0.03
NHLRC3-204ENST00000473371 CNTNAP1P78357 1384 aa14.89□□□□□ -0.03
NHLRC3-204ENST00000473371 LRRIQ4A6NIV6 560 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 AP1G2O75843 785 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 LDHAP00338 332 aaKnown RBP14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 ENO1P06733 434 aaKnown RBP14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 GSTA2P09210 222 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 TSHRP16473 764 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 PPP1R15BQ5SWA1 713 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 SLFN12LQ6IEE8 588 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 POLNQ7Z5Q5 900 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 RFX6Q8HWS3 928 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 IGDCC3Q8IVU1 814 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 SEPT12Q8IYM1 358 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 TMEM143Q96AN5 459 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 ZNF184Q99676 751 aaPredicted RBP14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 TARS2Q9BW92 718 aaKnown RBP14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 SLC38A10Q9HBR0 1119 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 SLC9A2Q9UBY0 812 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 ANGPTL2Q9UKU9 493 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 TELO2Q9Y4R8 837 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 STYXL1Q9Y6J8 313 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 ZNF646O15015 1829 aaPredicted RBP14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 YDJCA8MPS7 323 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 KBTBD13C9JR72 458 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 H3BRJ5 948 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 I3L4J1 428 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 K7ERI5 159 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 COPEO14579 308 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 KRT7P08729 469 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 POLE2P56282 527 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 INHBEP58166 350 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 EIF3EP60228 445 aaKnown RBP14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 SLC18A2Q05940 514 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 HADHQ16836 314 aaKnown RBP14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 GALNT15Q8N3T1 639 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 NIPA2Q8N8Q9 360 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 SLC44A1Q8WWI5 657 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 PPARGC1AQ9UBK2 798 aaKnown RBP14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 TCRBV9S1A1TA0A576 114 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 WDR46O15213 610 aaKnown RBP14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 KDELR1P24390 212 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 CCND2P30279 289 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 RFC1P35251 1148 aaPredicted RBP14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 MDH1BQ5I0G3 518 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 SMC1BQ8NDV3 1235 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 PHC3Q8NDX5 983 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 DEPTORQ8TB45 409 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 KRT82Q9NSB4 513 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 WDR35Q9P2L0 1181 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 EFR3BQ9Y2G0 817 aa14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.88□□□□□ -0.03
NHLRC3-204ENST00000473371 SMAPO00193 183 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 CIB2O75838 187 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 DGKZQ13574 1117 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 DPYSL3Q14195 570 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 EMC2Q15006 297 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 SYCP2LQ5T4T6 812 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 C6orf163Q5TEZ5 329 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 TMPRSS6Q8IU80 811 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 CCDC60Q8IWA6 550 aaPredicted RBP14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 CEP120Q8N960 986 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 FGD4Q96M96 766 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 TRIM4Q9C037 500 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 E5RJQ4 531 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 CST3P01034 146 aaPredicted RBP14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 IL1R2P27930 398 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 HSPA1LP34931 641 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 NRLP54845 237 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 CTAGE3PQ8IX95 158 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 KBTBD2Q8IY47 623 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 WDTC1Q8N5D0 677 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 UBR7Q8N806 425 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 TRAPPC9Q96Q05 1148 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 ZNF518BQ9C0D4 1074 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 ARHGEF4Q9NR80 690 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 FBXO40Q9UH90 709 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 KCNG1Q9UIX4 513 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 H0YIN7 160 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 MCF2LO15068 1137 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 PLSCR1O15162 318 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 LRCH4O75427 683 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 NR3C2P08235 984 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 CD48P09326 243 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 UBTFL6P0CB48 400 aaPredicted RBP14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 RBP3P10745 1247 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 ERFP50548 548 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 RAB27AP51159 221 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 RAP1GDS1P52306 607 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 SLC25A11Q02978 314 aaKnown RBP14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 BAATQ14032 418 aaPredicted RBP14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 THNSL1Q8IYQ7 743 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 GPRASP2Q96D09 838 aa14.87□□□□□ -0.03
NHLRC3-204ENST00000473371 IFT43Q96FT9 208 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms