RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, human

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCC1-208	ENST00000473062	PACSIN3	Q9UKS6	424 aa		4.08	□□□□□ -1.76
CLCC1-208	ENST00000473062	CAPN11	Q9UMQ6	739 aa		4.08	□□□□□ -1.76
CLCC1-208	ENST00000473062	USP22	Q9UPT9	525 aa		4.08	□□□□□ -1.76
CLCC1-208	ENST00000473062	RRP9	O43818	475 aa	Known RBP	4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	CCNT2	O60583	730 aa	Known RBP	4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	SRGAP2	O75044	1071 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	FGF18	O76093	207 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	TTLL1	O95922	423 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	FGFR2	P21802	821 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	GATA3	P23771	443 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	ZFP36	P26651	326 aa	Known RBP	4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	ALDH5A1	P51649	535 aa	Predicted RBP	4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	BCAT1	P54687	386 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	TPTE	P56180	551 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	SUMO2	P61956	95 aa	Known RBP	4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	TBC1D25	Q3MII6	688 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	PRR16	Q569H4	304 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	FAM209B	Q5JX69	171 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	SYCP2L	Q5T4T6	812 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	MRNIP	Q6NTE8	343 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	TOGARAM2	Q6ZUX3	1019 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	ZNF551	Q7Z340	670 aa	Predicted RBP	4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	TXLNB	Q8N3L3	684 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	SLC44A3	Q8N4M1	653 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	ENAH	Q8N8S7	591 aa	Predicted RBP	4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	RP9	Q8TA86	221 aa	Known RBP	4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	MYCBPAP	Q8TBZ2	947 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	CAGE1	Q8TC20	777 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	LPIN2	Q92539	896 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	NELL1	Q92832	810 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	PPP2R3C	Q969Q6	453 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	LTV1	Q96GA3	475 aa	Predicted RBP	4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	ZDHHC12	Q96GR4	267 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	MPHOSPH6	Q99547	160 aa	Known RBP	4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	AMBRA1	Q9C0C7	1298 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	ZBTB26	Q9HCK0	441 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	DNAJB11	Q9UBS4	358 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	CA14	Q9ULX7	337 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	HS3ST3A1	Q9Y663	406 aa		4.07	□□□□□ -1.76
CLCC1-208	ENST00000473062	CCDC78	A2IDD5	438 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	CD3EAP	O15446	510 aa	Known RBP	4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	COQ9	O75208	318 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	ZFPL1	O95159	310 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	GC	P02774	474 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	IL1R1	P14778	569 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	ZFX	P17010	805 aa	Predicted RBP	4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	NDUFB7	P17568	137 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	SLC5A2	P31639	672 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	GRIA3	P42263	894 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	TEC	P42680	631 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	TOB1	P50616	345 aa	Predicted RBP	4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	SEC24C	P53992	1094 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	ATXN1	P54253	815 aa	Known RBP	4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	RHBDL3	P58872	404 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	TGFB2	P61812	414 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	DPT	Q07507	201 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	SCAP	Q12770	1279 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	TBCC	Q15814	346 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	ST3GAL2	Q16842	350 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	FAXC	Q5TGI0	409 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	KIAA0895L	Q68EN5	471 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	PGBD2	Q6P3X8	592 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	RINL	Q6ZS11	566 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	MORC1	Q86VD1	984 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	SKAP1	Q86WV1	359 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	LIX1L	Q8IVB5	337 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	IZUMO1	Q8IYV9	350 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	ZNF384	Q8TF68	577 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	ATG4A	Q8WYN0	398 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	ZNF566	Q969W8	418 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	LRIG1	Q96JA1	1093 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	SNX27	Q96L92	541 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	DPCD	Q9BVM2	203 aa	Predicted RBP	4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	CXorf36	Q9H7Y0	433 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	NECTIN3	Q9NQS3	549 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	SYBU	Q9NX95	663 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	SERTAD3	Q9UJW9	196 aa		4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062	CCNL1	Q9UK58	526 aa	Predicted RBP	4.06	□□□□□ -1.76
CLCC1-208	ENST00000473062		H7C4K7	107 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	ADAMTS3	O15072	1205 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	FOXN1	O15353	648 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	A1BG	P04217	495 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	BTF3	P20290	206 aa	Known RBP	4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	RBL1	P28749	1068 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	CXCR5	P32302	372 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	ACVRL1	P37023	503 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	LIPA	P38571	399 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	PGD	P52209	483 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	MAPK10	P53779	464 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	FHL2	Q14192	279 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	STARD3	Q14849	445 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	CLCA4	Q14CN2	919 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	NPY5R	Q15761	445 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	ZNF750	Q32MQ0	723 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	C4orf46	Q504U0	113 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	VPS53	Q5VIR6	699 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	PLAG1	Q6DJT9	500 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	ANKRD16	Q6P6B7	361 aa		4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	COL23A1	Q86Y22	540 aa	Predicted RBP	4.05	□□□□□ -1.76
CLCC1-208	ENST00000473062	SYTL1	Q8IYJ3	562 aa		4.05	□□□□□ -1.76

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