RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 KLF8O95600 359 aaPredicted RBP21.2■□□□□ 0.98
CCDC78-208ENST00000471861 SLC6A11P48066 632 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 FAM193AP78312 1265 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 SIM1P81133 766 aaPredicted RBP21.2■□□□□ 0.98
CCDC78-208ENST00000471861 MRPS21P82921 87 aaKnown RBP21.2■□□□□ 0.98
CCDC78-208ENST00000471861 TFAMQ00059 246 aaKnown RBP21.2■□□□□ 0.98
CCDC78-208ENST00000471861 MYL7Q01449 175 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 GRIN1Q05586 938 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 EMC10Q5UCC4 262 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 SLC23A3Q6PIS1 610 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 SPATA2LQ8IUW3 424 aaPredicted RBP21.2■□□□□ 0.98
CCDC78-208ENST00000471861 FSIP1Q8NA03 581 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 WHAMMQ8TF30 809 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 POMGNT1Q8WZA1 660 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 RAD54LQ92698 747 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 FUBP3Q96I24 572 aaKnown RBP eCLIP21.2■□□□□ 0.98
CCDC78-208ENST00000471861 SLC32A1Q9H598 525 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 UPK3BL1B0FP48 263 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 UPK3BL2E5RIL1 263 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 SCAMP3O14828 347 aaKnown RBP21.19■□□□□ 0.98
CCDC78-208ENST00000471861 SLC26A4O43511 780 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 HUS1O60921 280 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 ADAM23O75077 832 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 ATP2C2O75185 946 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 KRT18P05783 430 aaKnown RBP21.19■□□□□ 0.98
CCDC78-208ENST00000471861 ITPKAP23677 461 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 TIE1P35590 1138 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 KIR2DL1P43626 348 aaPredicted RBP21.19■□□□□ 0.98
CCDC78-208ENST00000471861 KCNA1Q09470 495 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 MCTP1Q6DN14 999 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 FAM171BQ6P995 826 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 FILIP1Q7Z7B0 1213 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 BRSK2Q8IWQ3 736 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 ADGRF2Q8IZF7 708 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 TMEM86AQ8N2M4 240 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 LRRC52Q8N7C0 313 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 AK8Q96MA6 479 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 STRA6Q9BX79 667 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 GDAP2Q9NXN4 497 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 SIX4Q9UIU6 781 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 PILRBQ9UKJ0 227 aa21.19■□□□□ 0.98
CCDC78-208ENST00000471861 CIZ1Q9ULV3 898 aaPredicted RBP21.19■□□□□ 0.98
CCDC78-208ENST00000471861 ALDH1A2O94788 518 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 ABCD1P33897 745 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 MAGEA11P43364 429 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 DHCR24Q15392 516 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 SOWAHAQ2M3V2 549 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 LYSMD4Q5XG99 296 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 ZNF720Q7Z2F6 126 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 SFR1Q86XK3 245 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 ADGRG2Q8IZP9 1017 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 SPATA18Q8TC71 538 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 SAAL1Q96ER3 474 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 CALML4Q96GE6 196 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 SPACA7Q96KW9 195 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 KIF2CQ99661 725 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 FAM213AQ9BRX8 229 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 RNF38Q9H0F5 515 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 SNX9Q9Y5X1 595 aa21.18■□□□□ 0.98
CCDC78-208ENST00000471861 PI4KAP42356 2102 aa21.17■□□□□ 0.98
CCDC78-208ENST00000471861 GON4LQ3T8J9 2241 aa21.17■□□□□ 0.98
CCDC78-208ENST00000471861 KAT7O95251 611 aa21.17■□□□□ 0.98
CCDC78-208ENST00000471861 OLFM2O95897 454 aa21.17■□□□□ 0.98
CCDC78-208ENST00000471861 PSMC1P62191 440 aaKnown RBP21.17■□□□□ 0.98
CCDC78-208ENST00000471861 PHTF2Q8N3S3 785 aa21.17■□□□□ 0.98
CCDC78-208ENST00000471861 CHCHD4Q8N4Q1 142 aa21.17■□□□□ 0.98
CCDC78-208ENST00000471861 TOP6BLQ8N6T0 577 aa21.17■□□□□ 0.98
CCDC78-208ENST00000471861 KBTBD7Q8WVZ9 684 aa21.17■□□□□ 0.98
CCDC78-208ENST00000471861 HMGB4Q8WW32 186 aa21.17■□□□□ 0.98
CCDC78-208ENST00000471861 MYLPFQ96A32 169 aa21.17■□□□□ 0.98
CCDC78-208ENST00000471861 CRTAC1Q9NQ79 661 aa21.17■□□□□ 0.98
CCDC78-208ENST00000471861 ADAMTS9Q9P2N4 1935 aa21.17■□□□□ 0.98
CCDC78-208ENST00000471861 TCRBV21S2A2A0A5A6 115 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 FAM221BA6H8Z2 402 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 MAP3K13O43283 966 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 PCSK1P29120 753 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 UBA7P41226 1012 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 SLC7A9P82251 487 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 KDSRQ06136 332 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 SPDYCQ5MJ68 293 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 RHBDF2Q6PJF5 856 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 LIMS2Q7Z4I7 341 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 PROSER1Q86XN7 944 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 OR2I1PQ8NGU4 316 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 LARP4BQ92615 738 aaKnown RBP21.16■□□□□ 0.98
CCDC78-208ENST00000471861 SPATA17Q96L03 361 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 PNKPQ96T60 521 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 SYT15Q9BQS2 421 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 TTLL2Q9BWV7 592 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 MTMR12Q9C0I1 747 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 CAPN10Q9HC96 672 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 SMPD4Q9NXE4 827 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 ITGA11Q9UKX5 1188 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 CPQQ9Y646 472 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 CELSR3Q9NYQ7 3312 aa21.16■□□□□ 0.98
CCDC78-208ENST00000471861 A0A0A0MRY4 1105 aa21.15■□□□□ 0.98
CCDC78-208ENST00000471861 ZNF840PA6NDX5 716 aa21.15■□□□□ 0.98
CCDC78-208ENST00000471861 CFIP05156 583 aa21.15■□□□□ 0.98
CCDC78-208ENST00000471861 PFKLP17858 780 aa21.15■□□□□ 0.98
CCDC78-208ENST00000471861 BDNFP23560 247 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms