RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 MED16Q9Y2X0 877 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 MYMKA6NI61 221 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 AP4M1O00189 453 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 ERC2O15083 957 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 KCNAB3O43448 404 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 USP1O94782 785 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 PF4V1P10720 104 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 CYP2A6P11509 494 aaPredicted RBP4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 HOXB6P17509 224 aaKnown RBP4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 SFPQP23246 707 aaKnown RBP eCLIP4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 ADORA2AP29274 412 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 ALDH5A1P51649 535 aaPredicted RBP4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 DGKEP52429 567 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 WNT3P56703 355 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 IFIT1BQ5T764 474 aaKnown RBP4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 LMBRD2Q68DH5 695 aaPredicted RBP4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 KIRREL2Q6UWL6 708 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 MRPL10Q7Z7H8 261 aaKnown RBP4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 NANOGP1Q8N7R0 232 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 DNAJC5GQ8N7S2 189 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 PPP2R3CQ969Q6 453 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 FYTTD1Q96QD9 318 aaKnown RBP4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 MESP1Q9BRJ9 268 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 THAP7Q9BT49 309 aaPredicted RBP4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 AMFRQ9UKV5 643 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 GABRQQ9UN88 632 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 FER1L4A9Z1Z3 1794 aa4.31□□□□□ -1.72
PRPF40A-207ENST00000471701 A0A088AWK7 358 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 TBC1D4O60343 1298 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 GCATO75600 419 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 BCAR3O75815 825 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 CSF1RP07333 972 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 SNHG28P0DPA3 235 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 FAM187BQ17R55 369 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 LY6KQ17RY6 165 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 ZNF260Q3ZCT1 412 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 C4orf46Q504U0 113 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 AWAT2Q6E213 333 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 ZNF783Q6ZMS7 281 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 KRT73Q86Y46 540 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 RAB11FIP4Q86YS3 637 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 CUL5Q93034 780 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 CXorf36Q9H7Y0 433 aa4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 TRNAU1APQ9NX07 287 aaKnown RBP4.3□□□□□ -1.72
PRPF40A-207ENST00000471701 TMEM232C9JQI7 657 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 CES2O00748 559 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 AP1G1O43747 822 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 MARCH6O60337 910 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 FGBP02675 491 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 PHKG2P15735 406 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 KCNA3P22001 575 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 PRKAR1BP31321 381 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 RENBPP51606 427 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 NEK2P51955 445 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 SUMO2P61956 95 aaKnown RBP4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 E2F1Q01094 437 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 GHRHRQ02643 423 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 ZNF268Q14587 947 aaPredicted RBP4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 LRRC41Q15345 812 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 PLA1AQ53H76 456 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 ZNF813Q6ZN06 617 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 DAAM2Q86T65 1068 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 SPARTQ8N0X7 666 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 MPP5Q8N3R9 675 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 CELF5Q8N6W0 485 aaKnown RBP4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 OR6B3Q8NGW1 331 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 PLBD2Q8NHP8 589 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 RSPRY1Q96DX4 576 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 P2RX7Q99572 595 aaKnown RBP4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 WACQ9BTA9 647 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 MS4A7Q9GZW8 240 aaPredicted RBP4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 KLHL13Q9P2N7 655 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 PI4KBQ9UBF8 816 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 STAP2Q9UGK3 403 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 USP22Q9UPT9 525 aa4.29□□□□□ -1.72
PRPF40A-207ENST00000471701 A0A1W2PPL8 197 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 BTBD19C9JJ37 291 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 BTN3A1O00481 513 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 TRIM38O00635 465 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 SOCS2O14508 198 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 FCHO1O14526 889 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 A1BGP04217 495 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 TMEM191BP0C7N4 346 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 HSPA6P17066 643 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 NCLP19338 710 aaKnown RBP4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 ATP5F1P24539 256 aaPredicted RBP4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 FOXG1P55316 489 aaPredicted RBP4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 KRTAP10-9P60411 292 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 RAB1AP62820 205 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 CTBP1Q13363 440 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 Q4G0T1 1027 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 TMEM63BQ5T3F8 832 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 DENND2CQ68D51 928 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 TECPR1Q7Z6L1 1165 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 GAS2L3Q86XJ1 694 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 SFTPA1Q8IWL2 248 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 PIGOQ8TEQ8 1089 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 KBTBD7Q8WVZ9 684 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 RAPGEF4Q8WZA2 1011 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 HOOK2Q96ED9 719 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms