RNA–Protein interactions for RNA: ENST00000471620.1

CBWD5-218, Transcript of COBW domain containing 5, human

TSL 3

Gene CBWD5, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD5-218	ENST00000471620	DDX17	Q92841	729 aa	Known RBP	4.16	□□□□□ -1.74
CBWD5-218	ENST00000471620	FYTTD1	Q96QD9	318 aa	Known RBP	4.16	□□□□□ -1.74
CBWD5-218	ENST00000471620	ZPBP	Q9BS86	351 aa		4.16	□□□□□ -1.74
CBWD5-218	ENST00000471620	TTYH3	Q9C0H2	523 aa		4.16	□□□□□ -1.74
CBWD5-218	ENST00000471620	CFAP20	Q9Y6A4	193 aa	Known RBP	4.16	□□□□□ -1.74
CBWD5-218	ENST00000471620	TTC3	P53804	2025 aa		4.16	□□□□□ -1.74
CBWD5-218	ENST00000471620	TCF20	Q9UGU0	1960 aa	Known RBP	4.15	□□□□□ -1.74
CBWD5-218	ENST00000471620	BTBD19	C9JJ37	291 aa		4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	FGF2	P09038	288 aa		4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	CTSA	P10619	480 aa		4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	PIM1	P11309	404 aa	Predicted RBP	4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	SMARCA1	P28370	1054 aa		4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	LILRA4	P59901	499 aa		4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	ZXDB	P98169	803 aa		4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	SEC23B	Q15437	767 aa		4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	INAVA	Q3KP66	663 aa		4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	SPATS2	Q86XZ4	545 aa	Known RBP	4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	WBP1	Q96G27	269 aa		4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	ZDHHC8	Q9ULC8	765 aa		4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	NDRG4	Q9ULP0	352 aa	Known RBP	4.15	□□□□□ -1.75
CBWD5-218	ENST00000471620	ATXN1L	P0C7T5	689 aa	Known RBP	4.14	□□□□□ -1.75
CBWD5-218	ENST00000471620	FTH1P19	P0C7X4	201 aa		4.14	□□□□□ -1.75
CBWD5-218	ENST00000471620	PLA2G2A	P14555	144 aa		4.14	□□□□□ -1.75
CBWD5-218	ENST00000471620	PXN	P49023	591 aa	Predicted RBP	4.14	□□□□□ -1.75
CBWD5-218	ENST00000471620	LONRF3	Q496Y0	759 aa		4.14	□□□□□ -1.75
CBWD5-218	ENST00000471620	LIX1L	Q8IVB5	337 aa		4.14	□□□□□ -1.75
CBWD5-218	ENST00000471620	NR4A3	Q92570	626 aa		4.14	□□□□□ -1.75
CBWD5-218	ENST00000471620	SERPINB13	Q9UIV8	391 aa		4.14	□□□□□ -1.75
CBWD5-218	ENST00000471620	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.14	□□□□□ -1.75
CBWD5-218	ENST00000471620	IFITM10	A6NMD0	228 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	PCDHGA12	O60330	932 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	RPLP2	P05387	115 aa	Known RBP	4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	MYCL	P12524	364 aa	Predicted RBP	4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	PSG6	Q00889	435 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	E2F1	Q01094	437 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	AWAT1	Q58HT5	328 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	TMTC4	Q5T4D3	741 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	LAYN	Q6UX15	382 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	ANKRD13B	Q86YJ7	626 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	WDR66	Q8TBY9	1149 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	ZNF479	Q96JC4	524 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	TFCP2L1	Q9NZI6	479 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	PCDHGA8	Q9Y5G5	932 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	PCDHGA7	Q9Y5G6	932 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	PCDHGA6	Q9Y5G7	932 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	PCDHGA3	Q9Y5H0	932 aa		4.13	□□□□□ -1.75
CBWD5-218	ENST00000471620	LACTBL1	A8MY62	500 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	AP4M1	O00189	453 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	GCAT	O75600	419 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	GNAI2	P04899	355 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	PRKCB	P05771	671 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	CSF1R	P07333	972 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	KIF23	Q02241	960 aa	Predicted RBP	4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	E2F2	Q14209	437 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	IQCB1	Q15051	598 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	TMPRSS12	Q86WS5	348 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	MMP21	Q8N119	569 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	CBARP	Q8N350	705 aa	Predicted RBP	4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	CHAC2	Q8WUX2	184 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	DNASE2B	Q8WZ79	361 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	UBXN4	Q92575	508 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	TNPO1	Q92973	898 aa	Known RBP	4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	CCDC17	Q96LX7	622 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	DRC1	Q96MC2	740 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	MRPL46	Q9H2W6	279 aa	Known RBP	4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	PCDHA3	Q9Y5H8	950 aa		4.12	□□□□□ -1.75
CBWD5-218	ENST00000471620	PRSS47	A8MTI9	375 aa		4.11	□□□□□ -1.75
CBWD5-218	ENST00000471620	FGA	P02671	866 aa		4.11	□□□□□ -1.75
CBWD5-218	ENST00000471620	MTX1	Q13505	466 aa		4.11	□□□□□ -1.75
CBWD5-218	ENST00000471620	ACAP2	Q15057	778 aa		4.11	□□□□□ -1.75
CBWD5-218	ENST00000471620	PGM2L1	Q6PCE3	622 aa		4.11	□□□□□ -1.75
CBWD5-218	ENST00000471620	DPY19L3	Q6ZPD9	716 aa		4.11	□□□□□ -1.75
CBWD5-218	ENST00000471620	C3orf20	Q8ND61	904 aa		4.11	□□□□□ -1.75
CBWD5-218	ENST00000471620	MPLKIP	Q8TAP9	179 aa		4.11	□□□□□ -1.75
CBWD5-218	ENST00000471620	FAM84B	Q96KN1	310 aa	Predicted RBP	4.11	□□□□□ -1.75
CBWD5-218	ENST00000471620	PRR25	Q96S07	402 aa		4.11	□□□□□ -1.75
CBWD5-218	ENST00000471620	hCG_1984214	I3L0E3	225 aa		4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	MT-CO3	P00414	261 aa		4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	RPS13	P62277	151 aa	Known RBP	4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	INPP5J	Q15735	1006 aa	Predicted RBP	4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	ASIC2	Q16515	512 aa		4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	LY6K	Q17RY6	165 aa		4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	C9orf50	Q5SZB4	431 aa		4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	DEPDC1	Q5TB30	811 aa		4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	GFI1B	Q5VTD9	330 aa		4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	RNF219	Q5W0B1	726 aa	Predicted RBP	4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	PPP1R3B	Q86XI6	285 aa		4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	SFTPA1	Q8IWL2	248 aa		4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	CPA6	Q8N4T0	437 aa		4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	WIPF2	Q8TF74	440 aa	Predicted RBP	4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	LMLN	Q96KR4	655 aa		4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	WDCP	Q9H6R7	721 aa		4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	MRPS17	Q9Y2R5	130 aa	Known RBP	4.1	□□□□□ -1.75
CBWD5-218	ENST00000471620	NTN3	O00634	580 aa	Predicted RBP	4.09	□□□□□ -1.75
CBWD5-218	ENST00000471620	RNF8	O76064	485 aa		4.09	□□□□□ -1.75
CBWD5-218	ENST00000471620	VNN1	O95497	513 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms