RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 PREBQ9HCU5 417 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 FSCN3Q9NQT6 498 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 TMOD4Q9NZQ9 345 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 SHOC2Q9UQ13 582 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 HDAC5Q9UQL6 1122 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 RNF114Q9Y508 228 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 FAM90A18PA6NE21 464 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 FAM90A16PA6NEW6 464 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 DRGXA6NNA5 263 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 FAM90A9PA6NNJ1 464 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 FAM90A5PA8MXJ8 464 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 K7ENM7 598 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 TCERG1O14776 1098 aaKnown RBP7.56□□□□□ -1.2
SMC5-202ENST00000471372 RGS10O43665 173 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 PPP6R2O75170 966 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 ATXN1LP0C7T5 689 aaKnown RBP7.56□□□□□ -1.2
SMC5-202ENST00000471372 FAM90A15PP0C7V4 464 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 FAM90A14PP0C7W9 464 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 PRKG2Q13237 762 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 ATP1A4Q13733 1029 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 MLANAQ16655 118 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 ZNF568Q3ZCX4 644 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 TTC22Q5TAA0 569 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 SLC9C2Q5TAH2 1124 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 MAP3K21Q5TCX8 1036 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 ABLIM2Q6H8Q1 611 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 EFCAB12Q6NXP0 572 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 TAF2Q6P1X5 1199 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 NFRKBQ6P4R8 1299 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 FAM111BQ6SJ93 734 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 RAB11FIP2Q7L804 512 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 TSPYL6Q8N831 410 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 ADAMTS17Q8TE56 1095 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 ADAMTS18Q8TE60 1221 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 PPP2R3CQ969Q6 453 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 ZUFSPQ96AP4 578 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 TRIB1Q96RU8 372 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 SMOQ99835 787 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 CPPED1Q9BRF8 314 aaPredicted RBP7.56□□□□□ -1.2
SMC5-202ENST00000471372 GPR63Q9BZJ6 419 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 SMOC2Q9H3U7 446 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 CHODLQ9H9P2 273 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 OLA1Q9NTK5 396 aaKnown RBP7.56□□□□□ -1.2
SMC5-202ENST00000471372 ARHGAP26Q9UNA1 814 aa7.56□□□□□ -1.2
SMC5-202ENST00000471372 MRPS17Q9Y2R5 130 aaKnown RBP7.56□□□□□ -1.2
SMC5-202ENST00000471372 A0A1W2PPH5 198 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 PMS2P1A4D2B8 440 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 SH3D21A4FU49 640 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 C9orf118A6NHY6 69 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 PRR5-ARHGAP8B1AHC4 643 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 E7EVH7 732 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 DHHO43323 396 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 CCNT2O60583 730 aaKnown RBP7.55□□□□□ -1.2
SMC5-202ENST00000471372 SRGAP2O75044 1071 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 LMNAP02545 664 aaKnown RBP7.55□□□□□ -1.2
SMC5-202ENST00000471372 HNRNPA1P09651 372 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMC5-202ENST00000471372 PI3P19957 117 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 DGKEP52429 567 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 CHN2P52757 468 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 DCAF7P61962 342 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 TAPT1Q6NXT6 567 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 BBS12Q6ZW61 710 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 FASTKD5Q7L8L6 764 aaKnown RBP7.55□□□□□ -1.2
SMC5-202ENST00000471372 ANKS1BQ7Z6G8 1248 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 FAM83AQ86UY5 434 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 KBTBD2Q8IY47 623 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 CARFQ8N187 725 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 TMEM57Q8N5G2 664 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 DNAJB14Q8TBM8 379 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 NUP133Q8WUM0 1156 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 ST8SIA4Q92187 359 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 KCNN1Q92952 543 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 MARS2Q96GW9 593 aaKnown RBP7.55□□□□□ -1.2
SMC5-202ENST00000471372 LCORQ96JN0 433 aaPredicted RBP7.55□□□□□ -1.2
SMC5-202ENST00000471372 DPYSL5Q9BPU6 564 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 PAIP1Q9H074 479 aaKnown RBP7.55□□□□□ -1.2
SMC5-202ENST00000471372 BRD8Q9H0E9 1235 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 C12orf65Q9H3J6 166 aaKnown RBP7.55□□□□□ -1.2
SMC5-202ENST00000471372 G6PC2Q9NQR9 355 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 POGKQ9P215 609 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 ASAP1Q9ULH1 1129 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.55□□□□□ -1.2
SMC5-202ENST00000471372 RAD54BQ9Y620 910 aa7.55□□□□□ -1.2
SMC5-202ENST00000471372 TAF5LO75529 589 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 HGFP14210 728 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 KCNA3P22001 575 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 GCLCP48506 637 aaPredicted RBP7.54□□□□□ -1.2
SMC5-202ENST00000471372 PXNP49023 591 aaPredicted RBP7.54□□□□□ -1.2
SMC5-202ENST00000471372 CASP6P55212 293 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 MYO1EQ12965 1108 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 TRIM60Q495X7 471 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 SPATA1Q5VX52 437 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 ITPRIPL1Q6GPH6 555 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 LAYNQ6UX15 382 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 SYT13Q7L8C5 426 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 ANKRD52Q8NB46 1076 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 SNRNP27Q8WVK2 155 aaKnown RBP7.54□□□□□ -1.2
SMC5-202ENST00000471372 RFFLQ8WZ73 363 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 SERINC2Q96SA4 455 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 GPR20Q99678 358 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms