RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 LONRF2Q1L5Z9 754 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 LRRC26Q2I0M4 334 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 INTS6LQ5JSJ4 861 aaKnown RBP9.87□□□□□ -0.83
VPS52-216ENST00000471309 OVOS1Q6IE37 1185 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 OR6B2Q6IFH4 312 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 C8orf74Q6P047 294 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 WDR93Q6P2C0 686 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 FAM171BQ6P995 826 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 CLEC20AQ6ZU45 233 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 PAQR9Q6ZVX9 377 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 SLC26A9Q7LBE3 791 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 ARCQ7LC44 396 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 NECAB2Q7Z6G3 386 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 PIGZQ86VD9 579 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 THEM5Q8N1Q8 247 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 EMC1Q8N766 993 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 EXD1Q8NHP7 514 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 HASPINQ8TF76 798 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 SMARCD1Q96GM5 515 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 PCED1BQ96HM7 432 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 PIWIL1Q96J94 861 aaKnown RBP9.87□□□□□ -0.83
VPS52-216ENST00000471309 RHOXF2Q9BQY4 288 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 CNPY3Q9BT09 278 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 MED10Q9BTT4 135 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 B3GNT5Q9BYG0 378 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 SLITRK6Q9H5Y7 841 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 ARGLU1Q9NWB6 273 aaPredicted RBP9.87□□□□□ -0.83
VPS52-216ENST00000471309 DNAJB4Q9UDY4 337 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 RAB21Q9UL25 225 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 USTQ9Y2C2 406 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 TTC3P53804 2025 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 PTPRDP23468 1912 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 MYBPHLA2RUH7 354 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 F8VP50 259 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 F8W810 466 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 PIK3R2O00459 728 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 SYN3O14994 580 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 KIAA0355O15063 1070 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 LRCH4O75427 683 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 GABBR2O75899 941 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 OAZ2O95190 189 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 PCK1P35558 622 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 RNASE9P60153 205 aaKnown RBP9.86□□□□□ -0.83
VPS52-216ENST00000471309 SLC25A11Q02978 314 aaKnown RBP9.86□□□□□ -0.83
VPS52-216ENST00000471309 YWHAHQ04917 246 aaPredicted RBP9.86□□□□□ -0.83
VPS52-216ENST00000471309 BRD3Q15059 726 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 DAB2IPQ5VWQ8 1189 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 CC2D1AQ6P1N0 951 aaPredicted RBP9.86□□□□□ -0.83
VPS52-216ENST00000471309 FBXO38Q6PIJ6 1188 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 DEFB128Q7Z7B8 93 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 SLC13A5Q86YT5 568 aaPredicted RBP9.86□□□□□ -0.83
VPS52-216ENST00000471309 OR10T2Q8NGX3 314 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 MYLPFQ96A32 169 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 VWCEQ96DN2 955 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 RBM41Q96IZ5 413 aaKnown RBP9.86□□□□□ -0.83
VPS52-216ENST00000471309 PNKPQ96T60 521 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 NCAPGQ9BPX3 1015 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 COLEC11Q9BWP8 271 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 AP1M1Q9BXS5 423 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 PARD6BQ9BYG5 372 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 UBXN6Q9BZV1 441 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 EPC1Q9H2F5 836 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 NRDE2Q9H7Z3 1164 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.86□□□□□ -0.83
VPS52-216ENST00000471309 ASNSD1Q9NWL6 643 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 MARCH5Q9NX47 278 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 DDX56Q9NY93 547 aaKnown RBP9.86□□□□□ -0.83
VPS52-216ENST00000471309 ADAM28Q9UKQ2 775 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 MTUS1Q9ULD2 1270 aa9.86□□□□□ -0.83
VPS52-216ENST00000471309 PRG3Q9Y2Y8 225 aaPredicted RBP9.86□□□□□ -0.83
VPS52-216ENST00000471309 SF3B1O75533 1304 aaKnown RBP eCLIP9.85□□□□□ -0.83
VPS52-216ENST00000471309 ABHD14A-ACY1A0A1B0GW23 586 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 CCDC151A5D8V7 595 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 TBKBP1A7MCY6 615 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 CLDN5O00501 218 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 NRP1O14786 923 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 FSCN2O14926 492 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 SART1O43290 800 aaKnown RBP9.85□□□□□ -0.83
VPS52-216ENST00000471309 EFCAB14O75071 495 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 TADA2AO75478 443 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 DAB1O75553 588 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 AP1G2O75843 785 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 RNF8O76064 485 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 BEST1O76090 585 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 FBXO21O94952 628 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 TIMP1P01033 207 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 KRT1P04264 644 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 KRT7P08729 469 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 LCP1P13796 627 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 TCF4P15884 667 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 PDGFRAP16234 1089 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 DESP17661 470 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 PTPN7P35236 360 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 FLT3P36888 993 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 SSR1P43307 286 aaKnown RBP9.85□□□□□ -0.83
VPS52-216ENST00000471309 PTPN9P43378 593 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 GATMP50440 423 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 COPS2P61201 443 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 TSPY1Q01534 308 aa9.85□□□□□ -0.83
VPS52-216ENST00000471309 ADCY1Q08828 1119 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms