RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 TBC1D4O60343 1298 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 CSF1RP07333 972 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 DLDP09622 509 aaKnown RBP6.85□□□□□ -1.31
CCDC39-202ENST00000471307 SLC13A2Q13183 592 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 GRM1Q13255 1194 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 CTBP1Q13363 440 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 LRCH2Q5VUJ6 765 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 TCEAL8Q8IYN2 117 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 KIAA0319LQ8IZA0 1049 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 IL31RAQ8NI17 732 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 OSCP1Q8WVF1 389 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 NT5C1BQ96P26 610 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 ATP6V0A4Q9HBG4 840 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 GRIN2BQ13224 1484 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 CARMIL1Q5VZK9 1371 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 LOC105371045A0A1W2PR82 267 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 hCG_1984214I3L0E3 225 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 PRKCBP05771 671 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 KITP10721 976 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 KCNA3P22001 575 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 PDE1AP54750 535 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 TPTEP56180 551 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 SP2Q02086 613 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 PROSER3Q2NL68 480 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 PCID2Q5JVF3 399 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 ZNF280BQ86YH2 543 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 RSPRY1Q96DX4 576 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 SMURF2Q9HAU4 748 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 SH3BP4Q9P0V3 963 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 L1RE1Q9UN81 338 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 ADAMTS5Q9UNA0 930 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 MRPS17Q9Y2R5 130 aaKnown RBP6.84□□□□□ -1.31
CCDC39-202ENST00000471307 PRXQ9BXM0 1461 aa6.84□□□□□ -1.31
CCDC39-202ENST00000471307 FNDC1Q4ZHG4 1894 aaPredicted RBP6.83□□□□□ -1.32
CCDC39-202ENST00000471307 ISM1B1AKI9 464 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 MYO1FO00160 1098 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 LATS1O95835 1130 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 SCGB1D2O95969 90 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 CERS1P27544 350 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 ABCG1P45844 678 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 PPP2R5AQ15172 486 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 EZH2Q15910 746 aaKnown RBP6.83□□□□□ -1.32
CCDC39-202ENST00000471307 ZIK1Q3SY52 487 aaPredicted RBP6.83□□□□□ -1.32
CCDC39-202ENST00000471307 PLA1AQ53H76 456 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 Q6ZWC4 215 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 ABRAQ8N0Z2 381 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 MAGEB6Q8N7X4 407 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 ABHD11Q8NFV4 315 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 R3HDM4Q96D70 268 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 MS4A7Q9GZW8 240 aaPredicted RBP6.83□□□□□ -1.32
CCDC39-202ENST00000471307 FAM204AQ9H8W3 233 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 A1CFQ9NQ94 594 aaKnown RBP6.83□□□□□ -1.32
CCDC39-202ENST00000471307 XPNPEP3Q9NQH7 507 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 KIF21BO75037 1637 aa6.83□□□□□ -1.32
CCDC39-202ENST00000471307 CUL7Q14999 1698 aa6.82□□□□□ -1.32
CCDC39-202ENST00000471307 COL3A1P02461 1466 aaPredicted RBP6.82□□□□□ -1.32
CCDC39-202ENST00000471307 RAPGEF2Q9Y4G8 1499 aa6.82□□□□□ -1.32
CCDC39-202ENST00000471307 DNAJC9-AS1A6NH13 148 aa6.82□□□□□ -1.32
CCDC39-202ENST00000471307 ENGP17813 658 aa6.82□□□□□ -1.32
CCDC39-202ENST00000471307 SLC7A1P30825 629 aa6.82□□□□□ -1.32
CCDC39-202ENST00000471307 TUBA4AP68366 448 aa6.82□□□□□ -1.32
CCDC39-202ENST00000471307 HOXA4Q00056 320 aaPredicted RBP6.82□□□□□ -1.32
CCDC39-202ENST00000471307 CERCAMQ5T4B2 595 aa6.82□□□□□ -1.32
CCDC39-202ENST00000471307 IZUMO1Q8IYV9 350 aa6.82□□□□□ -1.32
CCDC39-202ENST00000471307 XAGE5Q8WWM1 108 aa6.82□□□□□ -1.32
CCDC39-202ENST00000471307 C1QTNF7Q9BXJ2 289 aa6.82□□□□□ -1.32
CCDC39-202ENST00000471307 C22orf23Q9BZE7 217 aa6.82□□□□□ -1.32
CCDC39-202ENST00000471307 RGS17Q9UGC6 210 aaPredicted RBP6.82□□□□□ -1.32
CCDC39-202ENST00000471307 EID1Q9Y6B2 187 aa6.82□□□□□ -1.32
CCDC39-202ENST00000471307 EIF4G3O43432 1585 aaKnown RBP6.82□□□□□ -1.32
CCDC39-202ENST00000471307 PBRM1Q86U86 1689 aa6.81□□□□□ -1.32
CCDC39-202ENST00000471307 GOLGA3Q08378 1498 aa6.81□□□□□ -1.32
CCDC39-202ENST00000471307 H7C1Q1 480 aa6.81□□□□□ -1.32
CCDC39-202ENST00000471307 CACNB3P54284 484 aa6.81□□□□□ -1.32
CCDC39-202ENST00000471307 PRKAG1P54619 331 aa6.81□□□□□ -1.32
CCDC39-202ENST00000471307 DEPDC1Q5TB30 811 aa6.81□□□□□ -1.32
CCDC39-202ENST00000471307 PRAMEF17Q5VTA0 474 aa6.81□□□□□ -1.32
CCDC39-202ENST00000471307 ZNF782Q6ZMW2 699 aaPredicted RBP6.81□□□□□ -1.32
CCDC39-202ENST00000471307 RAVER1Q8IY67 606 aaKnown RBP6.81□□□□□ -1.32
CCDC39-202ENST00000471307 MPP5Q8N3R9 675 aa6.81□□□□□ -1.32
CCDC39-202ENST00000471307 BPIFB1Q8TDL5 484 aa6.81□□□□□ -1.32
CCDC39-202ENST00000471307 TCEAL9Q9UHQ7 104 aa6.81□□□□□ -1.32
CCDC39-202ENST00000471307 CCNL1Q9UK58 526 aaPredicted RBP6.81□□□□□ -1.32
CCDC39-202ENST00000471307 FHAD1B1AJZ9 1412 aa6.81□□□□□ -1.32
CCDC39-202ENST00000471307 MAGI1Q96QZ7 1491 aaPredicted RBP6.8□□□□□ -1.32
CCDC39-202ENST00000471307 MBD3L4A6NDZ8 208 aaPredicted RBP6.8□□□□□ -1.32
CCDC39-202ENST00000471307 MBD3L3A6NE82 208 aaPredicted RBP6.8□□□□□ -1.32
CCDC39-202ENST00000471307 TBX3O15119 743 aa6.8□□□□□ -1.32
CCDC39-202ENST00000471307 CCP110O43303 1012 aa6.8□□□□□ -1.32
CCDC39-202ENST00000471307 ERBB2P04626 1255 aa6.8□□□□□ -1.32
CCDC39-202ENST00000471307 CYP4F2P78329 520 aa6.8□□□□□ -1.32
CCDC39-202ENST00000471307 CNN3Q15417 329 aaKnown RBP6.8□□□□□ -1.32
CCDC39-202ENST00000471307 INSCQ1MX18 579 aa6.8□□□□□ -1.32
CCDC39-202ENST00000471307 TMEM119Q4V9L6 283 aa6.8□□□□□ -1.32
CCDC39-202ENST00000471307 SWSAP1Q6NVH7 229 aa6.8□□□□□ -1.32
CCDC39-202ENST00000471307 TRIM72Q6ZMU5 477 aa6.8□□□□□ -1.32
CCDC39-202ENST00000471307 SPSB4Q96A44 273 aa6.8□□□□□ -1.32
CCDC39-202ENST00000471307 NMD3Q96D46 503 aaKnown RBP6.8□□□□□ -1.32
CCDC39-202ENST00000471307 DAZAP1Q96EP5 407 aaKnown RBP6.8□□□□□ -1.32
CCDC39-202ENST00000471307 THAP7Q9BT49 309 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms