RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 SLC17A7Q9P2U7 560 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 AJAP1Q9UKB5 411 aaPredicted RBP4.41□□□□□ -1.7
VPS50-210ENST00000471188 SOX13Q9UN79 622 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 COG5Q9UP83 839 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 FRMD4BQ9Y2L6 1034 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 PCDHA3Q9Y5H8 950 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 CEPT1Q9Y6K0 416 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 CASZ1Q86V15 1759 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 CROCCQ5TZA2 2017 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 A0A1B0GTW7 788 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 PRR5-ARHGAP8B1AHC4 643 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 GOLGA8SH3BPF8 625 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 GOLGA8MH3BSY2 632 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 LAD1O00515 517 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 GDF9O60383 454 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 DNAJA2O60884 412 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 DDHD2O94830 711 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 CRTAMO95727 393 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 GGPS1O95749 300 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 CHEK2O96017 543 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 FTLP02792 175 aaPredicted RBP4.41□□□□□ -1.7
VPS50-210ENST00000471188 ENO2P09104 434 aaPredicted RBP4.41□□□□□ -1.7
VPS50-210ENST00000471188 NAT2P11245 290 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 CCDC130P13994 396 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 CPA3P15088 417 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 ZNF12P17014 697 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 CYP7A1P22680 504 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 TCF7P36402 384 aaPredicted RBP4.41□□□□□ -1.7
VPS50-210ENST00000471188 NAPAP54920 295 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 ADAM17P78536 824 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 ARHGAP8P85298 464 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 XIAPP98170 497 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 MYBPC1Q00872 1141 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 OTUD4Q01804 1114 aaKnown RBP4.41□□□□□ -1.7
VPS50-210ENST00000471188 PDIA2Q13087 525 aaKnown RBP4.41□□□□□ -1.7
VPS50-210ENST00000471188 UBAP2LQ14157 1087 aaKnown RBP4.41□□□□□ -1.7
VPS50-210ENST00000471188 DRAP1Q14919 205 aaPredicted RBP4.41□□□□□ -1.7
VPS50-210ENST00000471188 EFTUD2Q15029 972 aaKnown RBP eCLIP4.41□□□□□ -1.7
VPS50-210ENST00000471188 RGS21Q2M5E4 152 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 RALGPS1Q5JS13 557 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 PTCRAQ6ISU1 281 aaPredicted RBP4.41□□□□□ -1.7
VPS50-210ENST00000471188 C11orf74Q86VG3 221 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 CPNE8Q86YQ8 564 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 ANKMY2Q8IV38 441 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 RHOT2Q8IXI1 618 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 SLC43A3Q8NBI5 491 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 GABPB2Q8TAK5 448 aaPredicted RBP4.41□□□□□ -1.7
VPS50-210ENST00000471188 RPGRQ92834 1020 aaKnown RBP4.41□□□□□ -1.7
VPS50-210ENST00000471188 ATP2A3Q93084 1043 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 ITPKCQ96DU7 683 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 MRGPRX2Q96LB1 330 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 ACAP3Q96P50 834 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 FAM111AQ96PZ2 611 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 RAB34Q9BZG1 259 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 IFT122Q9HBG6 1241 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 VAT1LQ9HCJ6 419 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 BLOC1S4Q9NUP1 217 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 SLC38A7Q9NVC3 462 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 GPRC5DQ9NZD1 345 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 KIAA1522Q9P206 1035 aaPredicted RBP4.41□□□□□ -1.7
VPS50-210ENST00000471188 PCDHA6Q9UN73 950 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 ATP11BQ9Y2G3 1177 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 PCDHA8Q9Y5H6 950 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 PXDNQ92626 1479 aa4.41□□□□□ -1.7
VPS50-210ENST00000471188 LOC100653049A0A140TA62 436 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 POTECB2RU33 542 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 SNAP23O00161 211 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 PFDN6O15212 129 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 CLIC2O15247 247 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 UGT1A9O60656 530 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 KLHL41O60662 606 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 LPXNO60711 386 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 DGKIO75912 1065 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 KRT34O76011 436 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 ESRRBO95718 433 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 PROCP04070 461 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 CSF1RP07333 972 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 KRT10P13645 584 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 PSMC3P17980 439 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 UGT1A6P19224 532 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 MX2P20592 715 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 UGT1A1P22309 533 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 UGT1A4P22310 534 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 GNA11P29992 359 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 UGT1A3P35503 534 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 UGT1A5P35504 534 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 TRPC1P48995 793 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 MAPK10P53779 464 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 KCNQ4P56696 695 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 TMPRSS15P98073 1019 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 ARHGAP4P98171 946 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 CAV1Q03135 178 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 WASHC5Q12768 1159 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 GRB10Q13322 594 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 SF3B4Q15427 424 aaKnown RBP eCLIP4.4□□□□□ -1.72e-7■■□□□ 14.3
VPS50-210ENST00000471188 KCNJ8Q15842 424 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 CALCRLQ16602 461 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 ARL13BQ3SXY8 428 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 MSS51Q4VC12 460 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 RNF111Q6ZNA4 994 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms