RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 FAM186BQ8IYM0 893 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 DCP1BQ8IZD4 617 aaKnown RBP12.34□□□□□ -0.43
HLA-C-206ENST00000470363 SPEM1Q8N4L4 309 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 RIN3Q8TB24 985 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 BPIFB1Q8TDL5 484 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 CSGALNACT1Q8TDX6 532 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 MYRFLQ96LU7 910 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 SMG9Q9H0W8 520 aaKnown RBP12.34□□□□□ -0.43
HLA-C-206ENST00000470363 PDE11AQ9HCR9 933 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 ABCB6Q9NP58 842 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 RBM12Q9NTZ6 932 aaKnown RBP12.34□□□□□ -0.43
HLA-C-206ENST00000470363 RBAKQ9NYW8 714 aaPredicted RBP12.34□□□□□ -0.43
HLA-C-206ENST00000470363 ZMYM5Q9UJ78 669 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 SMG5Q9UPR3 1016 aaKnown RBP12.34□□□□□ -0.43
HLA-C-206ENST00000470363 PCDHB5Q9Y5E4 795 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 PTPRJQ12913 1337 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 TICRRQ7Z2Z1 1910 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 TEX33O43247 280 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 HRO43593 1189 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 HCRTO43612 131 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 TADA3O75528 432 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 EPB41P11171 864 aaKnown RBP12.33□□□□□ -0.44
HLA-C-206ENST00000470363 HOXA6P31267 233 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 HOXC13P31276 330 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 PSMC2P35998 433 aaKnown RBP12.33□□□□□ -0.44
HLA-C-206ENST00000470363 CXCL12P48061 93 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 NRLP54845 237 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 DMWDQ09019 674 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 PUM1Q14671 1186 aaKnown RBP eCLIP12.33□□□□□ -0.44
HLA-C-206ENST00000470363 VEPH1Q14D04 833 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 CCDC142Q17RM4 750 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 SOWAHAQ2M3V2 549 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 ARHGAP15Q53QZ3 475 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 FAM171BQ6P995 826 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 Q6ZS52 159 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 YAF2Q8IY57 180 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 TMEM86AQ8N2M4 240 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 GPD1LQ8N335 351 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 CELF5Q8N6W0 485 aaKnown RBP12.33□□□□□ -0.44
HLA-C-206ENST00000470363 SPATA18Q8TC71 538 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 CACTINQ8WUQ7 758 aaKnown RBP12.33□□□□□ -0.44
HLA-C-206ENST00000470363 USP13Q92995 863 aaPredicted RBP12.33□□□□□ -0.44
HLA-C-206ENST00000470363 ZNF560Q96MR9 790 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 TUBGCP2Q9BSJ2 902 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 PI4K2AQ9BTU6 479 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 HPS4Q9NQG7 708 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 INTS13Q9NVM9 706 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 ABI2Q9NYB9 513 aaPredicted RBP12.33□□□□□ -0.44
HLA-C-206ENST00000470363 ARMCX3Q9UH62 379 aaPredicted RBP12.33□□□□□ -0.44
HLA-C-206ENST00000470363 ITGA11Q9UKX5 1188 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 CCL26Q9Y258 94 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 FRMD4BQ9Y2L6 1034 aa12.33□□□□□ -0.44
HLA-C-206ENST00000470363 PES1O00541 588 aaKnown RBP12.32□□□□□ -0.44
HLA-C-206ENST00000470363 KIAA0391O15091 583 aaKnown RBP12.32□□□□□ -0.44
HLA-C-206ENST00000470363 SLC16A3O15427 465 aaKnown RBP12.32□□□□□ -0.44
HLA-C-206ENST00000470363 NOL4O94818 638 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 GNA14O95837 355 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 CYP2F1P24903 491 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 DDX6P26196 483 aaKnown RBP eCLIP12.32□□□□□ -0.447e-14■■□□□ 12.5
HLA-C-206ENST00000470363 KPNA1P52294 538 aaPredicted RBP12.32□□□□□ -0.44
HLA-C-206ENST00000470363 RBP5P82980 135 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 SNRNP35Q16560 246 aaKnown RBP12.32□□□□□ -0.44
HLA-C-206ENST00000470363 NFE2Q16621 373 aaPredicted RBP12.32□□□□□ -0.44
HLA-C-206ENST00000470363 CFAP221Q4G0U5 840 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 INTS6LQ5JSJ4 861 aaKnown RBP12.32□□□□□ -0.44
HLA-C-206ENST00000470363 DGKKQ5KSL6 1271 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 TXNDC8Q6A555 127 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 MON1AQ86VX9 555 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 TRIM59Q8IWR1 403 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 SYNPOQ8N3V7 929 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 TOP6BLQ8N6T0 577 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 STKLD1Q8NE28 680 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 ANKRD20A12PQ8NF67 263 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 OR5B17Q8NGF7 314 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 TTC8Q8TAM2 541 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 PLEKHO2Q8TD55 490 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 KBTBD7Q8WVZ9 684 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 TRMT2BQ96GJ1 504 aaKnown RBP12.32□□□□□ -0.44
HLA-C-206ENST00000470363 MTMR12Q9C0I1 747 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 PARD6AQ9NPB6 346 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 GKN1Q9NS71 199 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 DDX43Q9NXZ2 648 aaKnown RBP12.32□□□□□ -0.44
HLA-C-206ENST00000470363 GTF3C4Q9UKN8 822 aa12.32□□□□□ -0.44
HLA-C-206ENST00000470363 A0A1B0GTH6 734 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 MED19A0JLT2 244 aaPredicted RBP12.31□□□□□ -0.44
HLA-C-206ENST00000470363 LRRC10BA6NIK2 292 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 ZNF233A6NK53 670 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 DPYSL4O14531 572 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 HUS1O60921 280 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 TRIM49P0CI25 452 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 TRIM49CP0CI26 452 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 CSH1P0DML2 217 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 CSH2P0DML3 217 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 ACAT1P24752 427 aaKnown RBP12.31□□□□□ -0.44
HLA-C-206ENST00000470363 LMO2P25791 158 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 LHX1P48742 406 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 MARSP56192 900 aaKnown RBP12.31□□□□□ -0.44
HLA-C-206ENST00000470363 DLG4P78352 724 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 TSPY1Q01534 308 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms