RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 HPSEQ9Y251 543 aa33.4■■■□□ 2.94
HMG20B-209ENST00000470356 ZDHHC9Q9Y397 364 aa33.4■■■□□ 2.94
HMG20B-209ENST00000470356 CHURC1-FNTBB4DL54 471 aa33.39■■■□□ 2.94
HMG20B-209ENST00000470356 PFKLP17858 780 aa33.39■■■□□ 2.94
HMG20B-209ENST00000470356 FNTBP49356 437 aa33.39■■■□□ 2.94
HMG20B-209ENST00000470356 PDE6CP51160 858 aa33.39■■■□□ 2.94
HMG20B-209ENST00000470356 USP46P62068 366 aa33.39■■■□□ 2.94
HMG20B-209ENST00000470356 NOP14P78316 857 aaKnown RBP33.39■■■□□ 2.94
HMG20B-209ENST00000470356 DMWDQ09019 674 aa33.39■■■□□ 2.94
HMG20B-209ENST00000470356 USP4Q13107 963 aa33.39■■■□□ 2.94
HMG20B-209ENST00000470356 KCNB1Q14721 858 aa33.39■■■□□ 2.94
HMG20B-209ENST00000470356 FSTL4Q6MZW2 842 aa33.39■■■□□ 2.94
HMG20B-209ENST00000470356 OSCP1Q8WVF1 389 aa33.39■■■□□ 2.94
HMG20B-209ENST00000470356 DUS2Q9NX74 493 aaKnown RBP33.39■■■□□ 2.94
HMG20B-209ENST00000470356 TRPM5Q9NZQ8 1165 aa33.39■■■□□ 2.94
HMG20B-209ENST00000470356 RAB23Q9ULC3 237 aa33.39■■■□□ 2.94
HMG20B-209ENST00000470356 HELZP42694 1942 aaKnown RBP33.39■■■□□ 2.94
HMG20B-209ENST00000470356 A8MXQ7 604 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 F8VP50 259 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 PDXKO00764 312 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 TCF3P15923 654 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 CNR2P34972 360 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 KRT85P78386 507 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 BIRC3Q13489 604 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 TDRD10Q5VZ19 366 aaKnown RBP33.38■■■□□ 2.93
HMG20B-209ENST00000470356 LONP2Q86WA8 852 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 CPA6Q8N4T0 437 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 ELOVL4Q9GZR5 314 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 DPEP3Q9H4B8 488 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 ECT2Q9H8V3 914 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 ARHGAP26Q9UNA1 814 aa33.38■■■□□ 2.93
HMG20B-209ENST00000470356 SDK1Q7Z5N4 2213 aa33.37■■■□□ 2.93
HMG20B-209ENST00000470356 LRRIQ3A6PVS8 624 aaPredicted RBP33.37■■■□□ 2.93
HMG20B-209ENST00000470356 PPP3CCP48454 512 aa33.37■■■□□ 2.93
HMG20B-209ENST00000470356 B3GALNT2Q8NCR0 500 aa33.37■■■□□ 2.93
HMG20B-209ENST00000470356 SH3RF2Q8TEC5 729 aa33.37■■■□□ 2.93
HMG20B-209ENST00000470356 HRO43593 1189 aa33.36■■■□□ 2.93
HMG20B-209ENST00000470356 C4BPAP04003 597 aaKnown RBP33.36■■■□□ 2.93
HMG20B-209ENST00000470356 GJA4P35212 333 aa33.36■■■□□ 2.93
HMG20B-209ENST00000470356 NCOA4Q13772 614 aa33.36■■■□□ 2.93
HMG20B-209ENST00000470356 LAIR1Q6GTX8 287 aa33.36■■■□□ 2.93
HMG20B-209ENST00000470356 TTC16Q8NEE8 873 aa33.36■■■□□ 2.93
HMG20B-209ENST00000470356 ATP2A3Q93084 1043 aa33.36■■■□□ 2.93
HMG20B-209ENST00000470356 B3GNT5Q9BYG0 378 aa33.36■■■□□ 2.93
HMG20B-209ENST00000470356 GMEB2Q9UKD1 530 aa33.36■■■□□ 2.93
HMG20B-209ENST00000470356 NR3C1P04150 777 aa33.35■■■□□ 2.93
HMG20B-209ENST00000470356 IFNAR2P48551 515 aa33.35■■■□□ 2.93
HMG20B-209ENST00000470356 GALK1P51570 392 aa33.35■■■□□ 2.93
HMG20B-209ENST00000470356 ZNF699Q32M78 642 aa33.35■■■□□ 2.93
HMG20B-209ENST00000470356 EXOC4Q96A65 974 aa33.35■■■□□ 2.93
HMG20B-209ENST00000470356 CHAMP1Q96JM3 812 aa33.35■■■□□ 2.93
HMG20B-209ENST00000470356 ZNF518BQ9C0D4 1074 aa33.35■■■□□ 2.93
HMG20B-209ENST00000470356 FBRSL1Q9HCM7 1045 aaKnown RBP33.35■■■□□ 2.93
HMG20B-209ENST00000470356 TMEM30AQ9NV96 361 aa33.35■■■□□ 2.93
HMG20B-209ENST00000470356 WNT6Q9Y6F9 365 aa33.35■■■□□ 2.93
HMG20B-209ENST00000470356 SPAG17Q6Q759 2223 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 FAM237AA0A1B0GTK4 181 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 ZNF840PA6NDX5 716 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 ATG13O75143 517 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 RPN1P04843 607 aaKnown RBP33.34■■■□□ 2.93
HMG20B-209ENST00000470356 DRD1P21728 446 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 SYKP43405 635 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 CACNA2D1P54289 1103 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 SIM2Q14190 667 aaPredicted RBP33.34■■■□□ 2.93
HMG20B-209ENST00000470356 PUM1Q14671 1186 aaKnown RBP eCLIP33.34■■■□□ 2.932e-7■□□□□ 8.7
HMG20B-209ENST00000470356 EML3Q32P44 896 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 ZNF667Q5HYK9 610 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 HEATR6Q6AI08 1181 aaKnown RBP33.34■■■□□ 2.93
HMG20B-209ENST00000470356 PKN3Q6P5Z2 889 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 P2RY13Q9BPV8 354 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 SMYD3Q9H7B4 428 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 DLL3Q9NYJ7 618 aa33.34■■■□□ 2.93
HMG20B-209ENST00000470356 RALGAPA1Q6GYQ0 2036 aa33.33■■■□□ 2.93
HMG20B-209ENST00000470356 VNN1O95497 513 aa33.33■■■□□ 2.93
HMG20B-209ENST00000470356 EGFP01133 1207 aa33.33■■■□□ 2.93
HMG20B-209ENST00000470356 TGM1P22735 817 aa33.33■■■□□ 2.93
HMG20B-209ENST00000470356 CDH8P55286 799 aa33.33■■■□□ 2.93
HMG20B-209ENST00000470356 LPAL2Q16609 132 aa33.33■■■□□ 2.93
HMG20B-209ENST00000470356 PRR23BQ6ZRT6 265 aa33.33■■■□□ 2.93
HMG20B-209ENST00000470356 TMC2Q8TDI7 906 aa33.33■■■□□ 2.93
HMG20B-209ENST00000470356 CLDN5O00501 218 aa33.32■■■□□ 2.92
HMG20B-209ENST00000470356 NDUFA8P51970 172 aa33.32■■■□□ 2.92
HMG20B-209ENST00000470356 DLG4P78352 724 aa33.32■■■□□ 2.92
HMG20B-209ENST00000470356 WDR5BQ86VZ2 330 aa33.32■■■□□ 2.92
HMG20B-209ENST00000470356 LINC00597Q9H2U6 94 aa33.32■■■□□ 2.92
HMG20B-209ENST00000470356 SLC7A9P82251 487 aa33.31■■■□□ 2.92
HMG20B-209ENST00000470356 ZXDBP98169 803 aa33.31■■■□□ 2.92
HMG20B-209ENST00000470356 TAF10Q12962 218 aa33.31■■■□□ 2.92
HMG20B-209ENST00000470356 NR1H3Q13133 447 aa33.31■■■□□ 2.92
HMG20B-209ENST00000470356 SGSM1Q2NKQ1 1148 aa33.31■■■□□ 2.92
HMG20B-209ENST00000470356 ZACNQ401N2 412 aa33.31■■■□□ 2.92
HMG20B-209ENST00000470356 FBXO43Q4G163 708 aa33.31■■■□□ 2.92
HMG20B-209ENST00000470356 KIAA1958Q8N8K9 716 aa33.31■■■□□ 2.92
HMG20B-209ENST00000470356 TNIP3Q96KP6 325 aa33.31■■■□□ 2.92
HMG20B-209ENST00000470356 SLITRK1Q96PX8 696 aa33.31■■■□□ 2.92
HMG20B-209ENST00000470356 RNF38Q9H0F5 515 aa33.31■■■□□ 2.92
HMG20B-209ENST00000470356 SPTBN2O15020 2390 aa33.3■■■□□ 2.92
HMG20B-209ENST00000470356 IKBKBO14920 756 aa33.3■■■□□ 2.92
HMG20B-209ENST00000470356 KIF20AO95235 890 aa33.3■■■□□ 2.92
HMG20B-209ENST00000470356 OLFM2O95897 454 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms