RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 SOD2P04179 222 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 KRT3P12035 628 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 MAN1A1P33908 653 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 PBX3P40426 434 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 AMPD2Q01433 879 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 MESDQ14696 234 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 CFAP221Q4G0U5 840 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 DCUN1D2Q6PH85 259 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 DDX53Q86TM3 631 aaKnown RBP15.94■□□□□ 0.14
COL4A5-203ENST00000470339 PIGZQ86VD9 579 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 SPATA2LQ8IUW3 424 aaPredicted RBP15.94■□□□□ 0.14
COL4A5-203ENST00000470339 C2orf15Q8WU43 125 aaKnown RBP15.94■□□□□ 0.14
COL4A5-203ENST00000470339 PIK3R5Q8WYR1 880 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 SMOQ99835 787 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 TLR10Q9BXR5 811 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 L2HGDHQ9H9P8 463 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 KRT82Q9NSB4 513 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 TMLHEQ9NVH6 421 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 CHORDC1Q9UHD1 332 aaPredicted RBP15.94■□□□□ 0.14
COL4A5-203ENST00000470339 SNX12Q9UMY4 172 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 SAR1BQ9Y6B6 198 aa15.94■□□□□ 0.14
COL4A5-203ENST00000470339 MIF4GDA9UHW6 222 aaKnown RBP15.93■□□□□ 0.14
COL4A5-203ENST00000470339 CES2O00748 559 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 ENC1O14682 589 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 GABBR2O75899 941 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 PROSCO94903 275 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 FBXO21O94952 628 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 ATP1A1P05023 1023 aaKnown RBP15.93■□□□□ 0.14
COL4A5-203ENST00000470339 ATP2A2P16615 1042 aaKnown RBP15.93■□□□□ 0.14
COL4A5-203ENST00000470339 TCP1P17987 556 aaKnown RBP15.93■□□□□ 0.14
COL4A5-203ENST00000470339 MAGEA11P43364 429 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 RGS7P49802 495 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 SLC6A3Q01959 620 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 MLLT1Q03111 559 aaPredicted RBP15.93■□□□□ 0.14
COL4A5-203ENST00000470339 GPR17Q13304 367 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 PIGHQ14442 188 aaPredicted RBP15.93■□□□□ 0.14
COL4A5-203ENST00000470339 ACAP1Q15027 740 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 RPS6KA1Q15418 735 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 RAB41Q5JT25 222 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 RTP2Q5QGT7 225 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 OR6B2Q6IFH4 312 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 VSTM1Q6UX27 236 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 TAS1R1Q7RTX1 841 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 PHLDB2Q86SQ0 1253 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 NIPA2Q8N8Q9 360 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 HES6Q96HZ4 224 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 TMEM209Q96SK2 561 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 HERC2P3Q9BVR0 1158 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 VN1R3Q9BXE9 311 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 DMAP1Q9NPF5 467 aaPredicted RBP15.93■□□□□ 0.14
COL4A5-203ENST00000470339 MTRRQ9UBK8 725 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 TJP2Q9UDY2 1190 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 CDC23Q9UJX2 597 aa15.93■□□□□ 0.14
COL4A5-203ENST00000470339 PAPSS1O43252 624 aaPredicted RBP15.92■□□□□ 0.14
COL4A5-203ENST00000470339 BEST1O76090 585 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 FTCDO95954 541 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 BDNFP23560 247 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 MAP3K7CLP57077 242 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 RPL7AP62424 266 aaKnown RBP15.92■□□□□ 0.14
COL4A5-203ENST00000470339 DSG1Q02413 1049 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 KRT17Q04695 432 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 CCDC142Q17RM4 750 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 SLC39A12Q504Y0 691 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 EFHC1Q5JVL4 640 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 SLC8B1Q6J4K2 584 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 KIAA1841Q6NSI8 718 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 LLGL2Q6P1M3 1020 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 OLFML1Q6UWY5 402 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 FAM183BPQ6ZVS7 135 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 SCUBE3Q8IX30 993 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 SCML4Q8N228 414 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 ZMIZ2Q8NF64 920 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.92■□□□□ 0.14
COL4A5-203ENST00000470339 LRRC4Q9HBW1 653 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 TMEM59LQ9UK28 342 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 HYOU1Q9Y4L1 999 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 PCDHB5Q9Y5E4 795 aa15.92■□□□□ 0.14
COL4A5-203ENST00000470339 HHLA1C9JL84 531 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 GOLGA8SH3BPF8 625 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 SART1O43290 800 aaKnown RBP15.91■□□□□ 0.14
COL4A5-203ENST00000470339 TLL1O43897 1013 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 GLI1P08151 1106 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 LINC00271P0C7V0 271 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 COMTP21964 271 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 RFC1P35251 1148 aaPredicted RBP15.91■□□□□ 0.14
COL4A5-203ENST00000470339 FAM102AQ5T9C2 384 aaPredicted RBP15.91■□□□□ 0.14
COL4A5-203ENST00000470339 SLC26A9Q7LBE3 791 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 FBXO22Q8NEZ5 403 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 SPPL2BQ8TCT7 592 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 RIN2Q8WYP3 895 aaPredicted RBP15.91■□□□□ 0.14
COL4A5-203ENST00000470339 CD101Q93033 1021 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 MCEEQ96PE7 176 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 NCAPGQ9BPX3 1015 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 CNGB3Q9NQW8 809 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 ASNSD1Q9NWL6 643 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 RNF14Q9UBS8 474 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 SSX2IPQ9Y2D8 614 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 RWDD3Q9Y3V2 267 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 MRFAP1Q9Y605 127 aa15.91■□□□□ 0.14
COL4A5-203ENST00000470339 CCDC66A2RUB6 948 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms