RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 PDIA3P30101 505 aaKnown RBP5.76□□□□□ -1.49
PTPN4-209ENST00000469511 MCM2P49736 904 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 AKAP17AQ02040 695 aaKnown RBP5.76□□□□□ -1.49
PTPN4-209ENST00000469511 PTSQ03393 145 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 GRSF1Q12849 480 aaKnown RBP eCLIP5.76□□□□□ -1.49
PTPN4-209ENST00000469511 AAMPQ13685 434 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 C2orf27AQ580R0 203 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 SAMD5Q5TGI4 173 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 EMC10Q5UCC4 262 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 CENPPQ6IPU0 288 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 C1orf228Q6PIY5 440 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 CCNI2Q6ZMN8 369 aaPredicted RBP5.76□□□□□ -1.49
PTPN4-209ENST00000469511 SYT13Q7L8C5 426 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 BTLAQ7Z6A9 289 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 RASSF3Q86WH2 238 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 TTC30AQ86WT1 665 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 LURAP1LQ8IV03 231 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 MAB21L3Q8N8X9 362 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 GLIS3Q8NEA6 775 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 MDGA1Q8NFP4 955 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 FOXD4L4Q8WXT5 416 aaPredicted RBP5.76□□□□□ -1.49
PTPN4-209ENST00000469511 HSH2DQ96JZ2 352 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 DMRTB1Q96MA1 342 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 FAM129BQ96TA1 746 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 P2RY13Q9BPV8 354 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 GTPBP2Q9BX10 602 aaKnown RBP5.76□□□□□ -1.49
PTPN4-209ENST00000469511 CDT1Q9H211 546 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 TASP1Q9H6P5 420 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 NEUROD4Q9HD90 331 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 SH3GLB2Q9NR46 395 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 OBP2AQ9NY56 170 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 ANKFY1Q9P2R3 1169 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 TBX20Q9UMR3 447 aa5.76□□□□□ -1.49
PTPN4-209ENST00000469511 NUMA1Q14980 2115 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 K7EQS6 105 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 ABLIM1O14639 778 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 ATG13O75143 517 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 LARGE1O95461 756 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 PDGFAP04085 211 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 RPLP1P05386 114 aaKnown RBP5.75□□□□□ -1.49
PTPN4-209ENST00000469511 FTH1P19P0C7X4 201 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 ATP2B1P20020 1258 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 ITPKBP27987 946 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 MCM4P33991 863 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 GPR15P49685 360 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 IDH3AP50213 366 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 ARSDP51689 593 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 RCAN1P53805 252 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 CYP4F3Q08477 520 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 PLD1Q13393 1074 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 MAPK6Q16659 721 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 GAB4Q2WGN9 574 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 SLC10A6Q3KNW5 377 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 ZC2HC1CQ53FD0 456 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-209ENST00000469511 ATF7IP2Q5U623 682 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 SDHAF4Q5VUM1 108 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 TXNDC8Q6A555 127 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 PPP4R3AQ6IN85 833 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 ZNF280DQ6N043 979 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 LRRC69Q6ZNQ3 347 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 PIK3AP1Q6ZUJ8 805 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 HAUS6Q7Z4H7 955 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 NEK8Q86SG6 692 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 LRRTM3Q86VH5 581 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 ZBTB8OSQ8IWT0 167 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 CMTM8Q8IZV2 173 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 LEMD2Q8NC56 503 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 TTC16Q8NEE8 873 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 TSTD1Q8NFU3 115 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 OR10T2Q8NGX3 314 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 OLIG1Q8TAK6 271 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 USP33Q8TEY7 942 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 EDEM1Q92611 657 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 PSMG2Q969U7 264 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 ALKBH8Q96BT7 664 aaKnown RBP5.75□□□□□ -1.49
PTPN4-209ENST00000469511 ERLEC1Q96DZ1 483 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 UROC1Q96N76 676 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 SLC22A12Q96S37 553 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 CYP2S1Q96SQ9 504 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 TARS2Q9BW92 718 aaKnown RBP5.75□□□□□ -1.49
PTPN4-209ENST00000469511 AGXT2Q9BYV1 514 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 LINC00597Q9H2U6 94 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 SLC32A1Q9H598 525 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 CCDC86Q9H6F5 360 aaKnown RBP5.75□□□□□ -1.49
PTPN4-209ENST00000469511 RUBCNLQ9H714 662 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 ECT2Q9H8V3 914 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 GPAMQ9HCL2 828 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 PTPRHQ9HD43 1115 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 CD93Q9NPY3 652 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 EVLQ9UI08 416 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-209ENST00000469511 NUB1Q9Y5A7 615 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 WNT6Q9Y6F9 365 aa5.75□□□□□ -1.49
PTPN4-209ENST00000469511 TP53BP1Q12888 1972 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-209ENST00000469511 COL6A6A6NMZ7 2263 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 CCDC196A0A1B0GTZ2 297 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 FAM149AA5PLN7 773 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 EIF4E1BA6NMX2 242 aaKnown RBP5.74□□□□□ -1.49
PTPN4-209ENST00000469511 M0QZQ0 153 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 SGK1O00141 431 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 SCAMP3O14828 347 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms