RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 RNPC3Q96LT9 517 aaKnown RBP13.53□□□□□ -0.24
RUNX1-213ENST00000469087 MRPL47Q9HD33 250 aaKnown RBP13.53□□□□□ -0.24
RUNX1-213ENST00000469087 PTPRDP23468 1912 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 HHLA1C9JL84 531 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 GOLGA8SH3BPF8 625 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 PAPSS1O43252 624 aaPredicted RBP13.53□□□□□ -0.24
RUNX1-213ENST00000469087 RPL17P18621 184 aaKnown RBP13.53□□□□□ -0.24
RUNX1-213ENST00000469087 CASQ1P31415 396 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 PPM1AP35813 382 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 GSCP56915 257 aaPredicted RBP13.53□□□□□ -0.24
RUNX1-213ENST00000469087 DSG1Q02413 1049 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 GPR17Q13304 367 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 OR6B2Q6IFH4 312 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 C4orf50Q6ZRC1 276 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 FAM183BPQ6ZVS7 135 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 DAAM2Q86T65 1068 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 VPS52Q8N1B4 723 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 KIF18AQ8NI77 898 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 FEZF2Q8TBJ5 459 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 IPO4Q8TEX9 1081 aaKnown RBP13.53□□□□□ -0.24
RUNX1-213ENST00000469087 KCTD13Q8WZ19 329 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 PGLYRP2Q96PD5 576 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 ALS2CR12Q96Q35 445 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 CLSTN3Q9BQT9 956 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 UBXN6Q9BZV1 441 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 ABCB6Q9NP58 842 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 WDR35Q9P2L0 1181 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 MTRRQ9UBK8 725 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 BACE2Q9Y5Z0 518 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 CDY1Q9Y6F8 540 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 LINC01553A4QN01 128 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 TMEM191CA6NGB0 347 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 SIGLEC16A6NMB1 481 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 ARHGEF15O94989 841 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 FTCDO95954 541 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 KRT3P12035 628 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 LCP1P13796 627 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 BMPR1AP36894 532 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 GLUD2P49448 558 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 NDUFV1P49821 464 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 KRT17Q04695 432 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 MESDQ14696 234 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 PSMD5Q16401 504 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 NFE2Q16621 373 aaPredicted RBP13.52□□□□□ -0.25
RUNX1-213ENST00000469087 CFAP221Q4G0U5 840 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 SLC8B1Q6J4K2 584 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 DNAJC24Q6P3W2 148 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 RNF19BQ6ZMZ0 732 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 ATAD1Q8NBU5 361 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 CLEC4CQ8WTT0 213 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 KHSRPQ92945 711 aaKnown RBP eCLIP13.52□□□□□ -0.25
RUNX1-213ENST00000469087 PIWIL1Q96J94 861 aaKnown RBP13.52□□□□□ -0.25
RUNX1-213ENST00000469087 HERC2P3Q9BVR0 1158 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 OXCT2Q9BYC2 517 aaPredicted RBP13.52□□□□□ -0.25
RUNX1-213ENST00000469087 MIS12Q9H081 205 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 CYLDQ9NQC7 956 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 ABI2Q9NYB9 513 aaPredicted RBP13.52□□□□□ -0.25
RUNX1-213ENST00000469087 ANAPC7Q9UJX3 599 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 HYOU1Q9Y4L1 999 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 ALG6Q9Y672 507 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 SCINQ9Y6U3 715 aa13.52□□□□□ -0.25
RUNX1-213ENST00000469087 F8VP50 259 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 VNN2O95498 520 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 ATP1A1P05023 1023 aaKnown RBP13.51□□□□□ -0.25
RUNX1-213ENST00000469087 CPB1P15086 417 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 OR1D2P34982 312 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 RFC1P35251 1148 aaPredicted RBP13.51□□□□□ -0.25
RUNX1-213ENST00000469087 ACADSBP45954 432 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 TAF5Q15542 800 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 PTPROQ16827 1216 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 RAB41Q5JT25 222 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 OLFML1Q6UWY5 402 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 GPRIN1Q7Z2K8 1008 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 SPRED2Q7Z698 418 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 JOSD2Q8TAC2 188 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 AUTS2Q8WXX7 1259 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 CALR3Q96L12 384 aaKnown RBP13.51□□□□□ -0.25
RUNX1-213ENST00000469087 GDF15Q99988 308 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 SELENOOQ9BVL4 669 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 PACSIN2Q9UNF0 486 aaPredicted RBP13.51□□□□□ -0.25
RUNX1-213ENST00000469087 JRKLQ9Y4A0 524 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 PCDHB5Q9Y5E4 795 aa13.51□□□□□ -0.25
RUNX1-213ENST00000469087 WDR27A2RRH5 827 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 MTMR11A4FU01 709 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 CTAGE9A4FU28 777 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 MYO1FO00160 1098 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 CAPN15O75808 1086 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 GRIK1P39086 918 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 TKTL1P51854 596 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 SNX16P57768 344 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 SLC6A3Q01959 620 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 OGDHQ02218 1023 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 MEI1Q5TIA1 1274 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 DCUN1D2Q6PH85 259 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 NT5DC3Q86UY8 548 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 CPNE8Q86YQ8 564 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 TTC9BQ8N6N2 239 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 EMC1Q8N766 993 aa13.5□□□□□ -0.25
RUNX1-213ENST00000469087 NDRG1Q92597 394 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms