RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 DESP17661 470 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 IRS1P35568 1242 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 ACADSBP45954 432 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 MAP3K7CLP57077 242 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 KRT83P78385 493 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 MRPS5P82675 430 aaKnown RBP8.58□□□□□ -1.04
HDAC6-216ENST00000468949 FMO1Q01740 532 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 IFRD2Q12894 506 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-216ENST00000468949 RAB33AQ14088 237 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 CFAP221Q4G0U5 840 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 NAA35Q5VZE5 725 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 FAM171BQ6P995 826 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 RNF19BQ6ZMZ0 732 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 ZNF571Q7Z3V5 609 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-216ENST00000468949 IRF2BP2Q7Z5L9 587 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 KIAA1328Q86T90 577 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 RBM23Q86U06 439 aaKnown RBP8.58□□□□□ -1.04
HDAC6-216ENST00000468949 LRRC8AQ8IWT6 810 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 FUKQ8N0W3 1084 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 ANKRD52Q8NB46 1076 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 ATAD1Q8NBU5 361 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 ZNF461Q8TAF7 563 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 UBA3Q8TBC4 463 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 TFAP2BQ92481 460 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 GOLGA1Q92805 767 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 SECISBP2LQ93073 1101 aaKnown RBP8.58□□□□□ -1.04
HDAC6-216ENST00000468949 HLA-CQ95604 372 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 KLHL5Q96PQ7 755 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 ASB2Q96Q27 587 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 CDCA3Q99618 268 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-216ENST00000468949 CLSTN3Q9BQT9 956 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 B3GNT5Q9BYG0 378 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 RXFP1Q9HBX9 757 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.58□□□□□ -1.04
HDAC6-216ENST00000468949 EHD2Q9NZN4 543 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 ARHGAP20Q9P2F6 1191 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 ADAMTS1Q9UHI8 967 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 NME7Q9Y5B8 376 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 IRAK3Q9Y616 596 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 PRUNE2Q8WUY3 3088 aa8.58□□□□□ -1.04
HDAC6-216ENST00000468949 PRRC2BQ5JSZ5 2229 aaKnown RBP8.58□□□□□ -1.04
HDAC6-216ENST00000468949 A0A0C4DFX4 3053 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 ANKRD62A6NC57 917 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 HIDE1A8MVS5 230 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 F8VP50 259 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 XPO1O14980 1071 aaKnown RBP8.57□□□□□ -1.04
HDAC6-216ENST00000468949 ADAM12O43184 909 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 TGM5O43548 720 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 TBC1D4O60343 1298 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 CALB1P05937 261 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 ATF2P15336 505 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 CYP2F1P24903 491 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 DNAJB1P25685 340 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 MAGEA11P43364 429 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 NRIP1P48552 1158 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 EPHB3P54753 998 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 GFPT1Q06210 699 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-216ENST00000468949 PDE4CQ08493 712 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 DUSP4Q13115 394 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 PDCLQ13371 301 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 SLC18A3Q16572 532 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 CCDC142Q17RM4 750 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 CLEC16AQ2KHT3 1053 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 TCEAL5Q5H9L2 206 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 PPM1LQ5SGD2 360 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 CCDC122Q5T0U0 273 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 HGSNATQ68CP4 663 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 LLGL2Q6P1M3 1020 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 DENND1BQ6P3S1 775 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 ITIH5Q86UX2 942 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 LRRTM3Q86VH5 581 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 TTC30AQ86WT1 665 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 ERICH1Q86X53 443 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 KREMEN2Q8NCW0 462 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 SLC7A14Q8TBB6 771 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 CPA5Q8WXQ8 436 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 CTNNBL1Q8WYA6 563 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-216ENST00000468949 GCNAQ96QF7 691 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 CHP1Q99653 195 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 LPIN3Q9BQK8 851 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 DUSP16Q9BY84 665 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 RHOBTB2Q9BYZ6 727 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 LHX5Q9H2C1 402 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 UBE2ZQ9H832 354 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-216ENST00000468949 MAN1C1Q9NR34 630 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 SPTLC3Q9NUV7 552 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 TMLHEQ9NVH6 421 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 HSFX1Q9UBD0 423 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 STRIP2Q9ULQ0 834 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 YIPF1Q9Y548 306 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 PCDHGC5Q9Y5F6 944 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 INSL5Q9Y5Q6 135 aa8.57□□□□□ -1.04
HDAC6-216ENST00000468949 FAM170AA1A519 330 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 DLL1O00548 723 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 DDX3XO00571 662 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC6-216ENST00000468949 PER2O15055 1255 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 SART1O43290 800 aaKnown RBP8.56□□□□□ -1.04
HDAC6-216ENST00000468949 CLASP2O75122 1294 aaKnown RBP8.56□□□□□ -1.04
HDAC6-216ENST00000468949 XYLBO75191 536 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms