RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 ACVR2AP27037 513 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 CARSP49589 748 aaKnown RBP6.55□□□□□ -1.36
XRN1-207ENST00000468894 PLAC9Q5JTB6 97 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 TSTD2Q5T7W7 516 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 STRIP1Q5VSL9 837 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 CACHD1Q5VU97 1274 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 FCRL6Q6DN72 434 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 UNC13DQ70J99 1090 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 CCAR1Q8IX12 1150 aaKnown RBP6.55□□□□□ -1.36
XRN1-207ENST00000468894 PJA1Q8NG27 643 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 DNAJB14Q8TBM8 379 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 SOCS4Q8WXH5 440 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 PPP2R3CQ969Q6 453 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 R3HDM4Q96D70 268 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 STRBPQ96SI9 672 aaKnown RBP6.55□□□□□ -1.36
XRN1-207ENST00000468894 UNKQ9C0B0 810 aaKnown RBP6.55□□□□□ -1.36
XRN1-207ENST00000468894 SEMA4GQ9NTN9 838 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 SH2B3Q9UQQ2 575 aa6.55□□□□□ -1.36
XRN1-207ENST00000468894 GCOM1H8Y6P7 765 aaPredicted RBP6.54□□□□□ -1.36
XRN1-207ENST00000468894 FOXN3O00409 490 aaPredicted RBP6.54□□□□□ -1.36
XRN1-207ENST00000468894 KPNA5O15131 536 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 PRC1O43663 620 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 SRGAP2O75044 1071 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 VNN1O95497 513 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 PTDSS1P48651 473 aaKnown RBP6.54□□□□□ -1.36
XRN1-207ENST00000468894 NANOS3P60323 173 aaKnown RBP6.54□□□□□ -1.36
XRN1-207ENST00000468894 ZNF543Q08ER8 600 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 DAG1Q14118 895 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 NPY5RQ15761 445 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 LY6KQ17RY6 165 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 INSCQ1MX18 579 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 CERCAMQ5T4B2 595 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 BOLLQ8N9W6 283 aaKnown RBP6.54□□□□□ -1.36
XRN1-207ENST00000468894 SNX22Q96L94 193 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 BBC3Q96PG8 261 aaPredicted RBP6.54□□□□□ -1.36
XRN1-207ENST00000468894 TIMP4Q99727 224 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 BRIP1Q9BX63 1249 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 GBA2Q9HCG7 927 aaPredicted RBP6.54□□□□□ -1.36
XRN1-207ENST00000468894 ADAM21Q9UKJ8 722 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 ITGB1BP2Q9UKP3 347 aa6.54□□□□□ -1.36
XRN1-207ENST00000468894 ARHGEF17Q96PE2 2063 aaPredicted RBP6.53□□□□□ -1.36
XRN1-207ENST00000468894 H0YIZ8 118 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 RAB27BO00194 218 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 CAND2O75155 1236 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 IL18RAPO95256 599 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 MT-ND5P03915 603 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 WT1P19544 449 aaPredicted RBP6.53□□□□□ -1.36
XRN1-207ENST00000468894 CASP5P51878 434 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 ITGA8P53708 1063 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 ARHGEF7Q14155 803 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 KSR2Q6VAB6 950 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 RD3Q7Z3Z2 195 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 ARHGEF25Q86VW2 580 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 ADGRG3Q86Y34 549 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 RASAL3Q86YV0 1011 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 IZUMO1Q8IYV9 350 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 SPARTQ8N0X7 666 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 SARAFQ96BY9 339 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 HAPLN3Q96S86 360 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 DHX36Q9H2U1 1008 aaKnown RBP6.53□□□□□ -1.36
XRN1-207ENST00000468894 PNPLA8Q9NP80 782 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 TRMT13Q9NUP7 481 aaKnown RBP6.53□□□□□ -1.36
XRN1-207ENST00000468894 DLL3Q9NYJ7 618 aa6.53□□□□□ -1.36
XRN1-207ENST00000468894 RASAL1O95294 804 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 ONECUT2O95948 504 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 PHKG2P15735 406 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 TSHRP16473 764 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 ALDH9A1P49189 494 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 PRIM2P49643 509 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 CPT1AP50416 773 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 CCT8P50990 548 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 BCAT1P54687 386 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 SLC29A2Q14542 456 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 ZNF750Q32MQ0 723 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 AKNAD1Q5T1N1 836 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 SLC9A4Q6AI14 798 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 FBXO42Q6P3S6 717 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 LIX1LQ8IVB5 337 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 C17orf80Q9BSJ5 609 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 NAA15Q9BXJ9 866 aaKnown RBP6.52□□□□□ -1.37
XRN1-207ENST00000468894 ARNT2Q9HBZ2 717 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 CPNE5Q9HCH3 593 aa6.52□□□□□ -1.37
XRN1-207ENST00000468894 ARPP21Q9UBL0 812 aaPredicted RBP6.52□□□□□ -1.37
XRN1-207ENST00000468894 ANO9A1A5B4 782 aa6.51□□□□□ -1.37
XRN1-207ENST00000468894 POM121BA6NF01 834 aa6.51□□□□□ -1.37
XRN1-207ENST00000468894 CD3EAPO15446 510 aaKnown RBP6.51□□□□□ -1.37
XRN1-207ENST00000468894 PIAS2O75928 621 aa6.51□□□□□ -1.37
XRN1-207ENST00000468894 IGLV2-14P01704 120 aa6.51□□□□□ -1.37
XRN1-207ENST00000468894 ANXA2P07355 339 aaKnown RBP6.51□□□□□ -1.37
XRN1-207ENST00000468894 HMGB1P09429 215 aaKnown RBP6.51□□□□□ -1.37
XRN1-207ENST00000468894 PARP1P09874 1014 aaKnown RBP6.51□□□□□ -1.37
XRN1-207ENST00000468894 IL1R2P27930 398 aa6.51□□□□□ -1.37
XRN1-207ENST00000468894 CCNIQ14094 377 aa6.51□□□□□ -1.37
XRN1-207ENST00000468894 CCDC181Q5TID7 509 aa6.51□□□□□ -1.37
XRN1-207ENST00000468894 KLHDC7AQ5VTJ3 777 aa6.51□□□□□ -1.37
XRN1-207ENST00000468894 ANKRD16Q6P6B7 361 aa6.51□□□□□ -1.37
XRN1-207ENST00000468894 AMIGO2Q86SJ2 522 aa6.51□□□□□ -1.37
XRN1-207ENST00000468894 DNAJC10Q8IXB1 793 aa6.51□□□□□ -1.37
XRN1-207ENST00000468894 YAF2Q8IY57 180 aa6.51□□□□□ -1.37
XRN1-207ENST00000468894 LRRC71Q8N4P6 559 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms