RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SLC38A8A6NNN8 435 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 HEPACAM2A8MVW5 462 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 A8MXQ7 604 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 STK25O00506 426 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 ASS1P00966 412 aaKnown RBP15.4■□□□□ 0.06
COL27A1-203ENST00000468565 P4HA1P13674 534 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 CYP4F8P98187 520 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 MORC3Q14149 939 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 TPD52L1Q16890 204 aaPredicted RBP15.4■□□□□ 0.06
COL27A1-203ENST00000468565 CT47A1Q5JQC4 288 aaPredicted RBP15.4■□□□□ 0.06
COL27A1-203ENST00000468565 TMEM150AQ86TG1 271 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 CCDC105Q8IYK2 499 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 IRF7Q92985 503 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 SPATA17Q96L03 361 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 SMYD3Q9H7B4 428 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 NCANO14594 1321 aa15.4■□□□□ 0.06
COL27A1-203ENST00000468565 CETN3O15182 167 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 PTPN1P18031 435 aaKnown RBP15.39■□□□□ 0.05
COL27A1-203ENST00000468565 UBASH3AP57075 661 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 CCZ1BP86790 482 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 CCZ1P86791 482 aaPredicted RBP15.39■□□□□ 0.05
COL27A1-203ENST00000468565 CYP27A1Q02318 531 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 FCHO2Q0JRZ9 810 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 ARID5BQ14865 1188 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 MDH1BQ5I0G3 518 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 SDHAF4Q5VUM1 108 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 SCN4BQ8IWT1 228 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 ZC3H3Q8IXZ2 948 aaKnown RBP15.39■□□□□ 0.05
COL27A1-203ENST00000468565 RSPRY1Q96DX4 576 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 TSG101Q99816 390 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 MAGED2Q9UNF1 606 aaPredicted RBP15.39■□□□□ 0.05
COL27A1-203ENST00000468565 F5P12259 2224 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 KANSL1LA0AUZ9 987 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 ZNF263O14978 683 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 TRIM66O15016 1216 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 CLSTN1O94985 981 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 HLA-DRAP01903 254 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 EPB41P11171 864 aaKnown RBP15.39■□□□□ 0.05
COL27A1-203ENST00000468565 BDNFP23560 247 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 GDI1P31150 447 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 GTF2H1P32780 548 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 PPP1R2P41236 205 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 PIK3CAP42336 1068 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 PPP3CAQ08209 521 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 ADSSL1Q8N142 457 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 B3GALNT2Q8NCR0 500 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 PJA1Q8NG27 643 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 SLC46A2Q9BY10 475 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 OSBPL6Q9BZF3 934 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 HSD3B7Q9H2F3 369 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 DPEP3Q9H4B8 488 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 SIT1Q9Y3P8 196 aa15.39■□□□□ 0.05
COL27A1-203ENST00000468565 DPYSL4O14531 572 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 CHADO15335 359 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 TRIM49P0CI25 452 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 TRIM49CP0CI26 452 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 ATP1A3P13637 1013 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 BMP6P22004 513 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 ANXA13P27216 316 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 GRIK1P39086 918 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 GCLMP48507 274 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 CDH8P55286 799 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 LRRC63Q05C16 580 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 YAF2Q8IY57 180 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 CMTM8Q8IZV2 173 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 DTWD2Q8NBA8 298 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 STKLD1Q8NE28 680 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 ENOX1Q8TC92 643 aaKnown RBP15.38■□□□□ 0.05
COL27A1-203ENST00000468565 MRPS31Q92665 395 aaKnown RBP15.38■□□□□ 0.05
COL27A1-203ENST00000468565 C8orf48Q96LL4 319 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 IMPG2Q9BZV3 1241 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 ELOVL4Q9GZR5 314 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 SDCBP2Q9H190 292 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 TMEM8AQ9HCN3 771 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 FANCLQ9NW38 375 aa15.38■□□□□ 0.05
COL27A1-203ENST00000468565 ARNTLO00327 626 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 SLC16A3O15427 465 aaKnown RBP15.37■□□□□ 0.05
COL27A1-203ENST00000468565 TADA3O75528 432 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 ERCC5P28715 1186 aaPredicted RBP15.37■□□□□ 0.05
COL27A1-203ENST00000468565 ASPAP45381 313 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 FKBP3Q00688 224 aaKnown RBP15.37■□□□□ 0.05
COL27A1-203ENST00000468565 STIM1Q13586 685 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 SCARA5Q6ZMJ2 495 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 TPRG1Q6ZUI0 275 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 MON1AQ86VX9 555 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 CELF5Q8N6W0 485 aaKnown RBP15.37■□□□□ 0.05
COL27A1-203ENST00000468565 TNIP3Q96KP6 325 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 C16orf45Q96MC5 204 aaPredicted RBP15.37■□□□□ 0.05
COL27A1-203ENST00000468565 BCO2Q9BYV7 579 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 FOXQ1Q9C009 403 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 LTB4R2Q9NPC1 389 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 HEBP1Q9NRV9 189 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 KCND1Q9NSA2 647 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 EHD2Q9NZN4 543 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 DLGAP2Q9P1A6 1054 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 ATP8B3O60423 1300 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 PSMA7O14818 248 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 STX10O60499 249 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 PRAMEF12O95522 483 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 TNNT1P13805 278 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms