RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 HSPBP1Q9NZL4 362 aa12.77□□□□□ -0.37
GTF3A-205ENST00000466776 CEP192Q8TEP8 1941 aa12.77□□□□□ -0.37
GTF3A-205ENST00000466776 ABCA7Q8IZY2 2146 aa12.77□□□□□ -0.37
GTF3A-205ENST00000466776 PLXND1Q9Y4D7 1925 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 C2orf78A6NCI8 922 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 TNNI1P19237 187 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 BDNFP23560 247 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 GBP1P32455 592 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 DGKEP52429 567 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 SNRPFP62306 86 aaKnown RBP12.76□□□□□ -0.37
GTF3A-205ENST00000466776 TNNC1P63316 161 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 ASIC1P78348 528 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 PLK5Q496M5 336 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 USP39Q53GS9 565 aaKnown RBP12.76□□□□□ -0.37
GTF3A-205ENST00000466776 STPG1Q5TH74 334 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 LMBRD2Q68DH5 695 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-205ENST00000466776 FAM173BQ6P4H8 233 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 HS2ST1Q7LGA3 356 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 DDX42Q86XP3 938 aaKnown RBP eCLIP12.76□□□□□ -0.37
GTF3A-205ENST00000466776 TSTD1Q8NFU3 115 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 OR5B17Q8NGF7 314 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 MYCBPAPQ8TBZ2 947 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 KBTBD7Q8WVZ9 684 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 ZNF396Q96N95 335 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-205ENST00000466776 SLITRK1Q96PX8 696 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 SLC22A12Q96S37 553 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 GCNT4Q9P109 453 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 EBF1Q9UH73 591 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 UBE4BO95155 1302 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 PI4KAP42356 2102 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 MAP1BP46821 2468 aaKnown RBP12.76□□□□□ -0.37
GTF3A-205ENST00000466776 EPG5Q9HCE0 2579 aa12.76□□□□□ -0.37
GTF3A-205ENST00000466776 ATP8B3O60423 1300 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 ATP2C2O75185 946 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 ALDH1A2O94788 518 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 CLSTN1O94985 981 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 PDGFRBP09619 1106 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 FAM163BP0C2L3 166 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 DLATP10515 647 aaKnown RBP12.75□□□□□ -0.37
GTF3A-205ENST00000466776 GNL1P36915 607 aaPredicted RBP12.75□□□□□ -0.37
GTF3A-205ENST00000466776 NASPP49321 788 aaPredicted RBP12.75□□□□□ -0.37
GTF3A-205ENST00000466776 NOP14P78316 857 aaKnown RBP12.75□□□□□ -0.37
GTF3A-205ENST00000466776 CREB5Q02930 508 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 TRPC3Q13507 836 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 CCDC6Q16204 474 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 SNRNP35Q16560 246 aaKnown RBP12.75□□□□□ -0.37
GTF3A-205ENST00000466776 ST3GAL2Q16842 350 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 PLA2G2CQ5R387 149 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 TDRD10Q5VZ19 366 aaKnown RBP12.75□□□□□ -0.37
GTF3A-205ENST00000466776 RNF43Q68DV7 783 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 CBWD2Q8IUF1 395 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 IQUBQ8NA54 791 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 OR6B3Q8NGW1 331 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 PCED1BQ96HM7 432 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 FGFBP2Q9BYJ0 223 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 TRIM9Q9C026 710 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 ELOVL4Q9GZR5 314 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 MAGEF1Q9HAY2 307 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 FBRSL1Q9HCM7 1045 aaKnown RBP12.75□□□□□ -0.37
GTF3A-205ENST00000466776 CRTAC1Q9NQ79 661 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 KBTBD4Q9NVX7 518 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 ANGPTL2Q9UKU9 493 aa12.75□□□□□ -0.37
GTF3A-205ENST00000466776 PTPRJQ12913 1337 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 A0A087X0B3 334 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 F8VP50 259 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 LEFTY2O00292 366 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 SPTLC2O15270 562 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 HCRTO43612 131 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 STX6O43752 255 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 PPP6R2O75170 966 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 TACC1O75410 805 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 ABL1P00519 1130 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 LMO2P25791 158 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 HOXC13P31276 330 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 SLC7A9P82251 487 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 CCDC142Q17RM4 750 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 MDH1BQ5I0G3 518 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 FAM26FQ5R3K3 315 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 XXYLT1Q8NBI6 393 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 PDZD8Q8NEN9 1154 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 DHX58Q96C10 678 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 FAM84AQ96KN4 292 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 C8orf48Q96LL4 319 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 CGRRF1Q99675 332 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 EDEM2Q9BV94 578 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 TTLL2Q9BWV7 592 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 DUSP15Q9H1R2 295 aaPredicted RBP12.74□□□□□ -0.37
GTF3A-205ENST00000466776 CGNQ9P2M7 1197 aaKnown RBP12.74□□□□□ -0.37
GTF3A-205ENST00000466776 MTMR6Q9Y217 621 aa12.74□□□□□ -0.37
GTF3A-205ENST00000466776 ZNF840PA6NDX5 716 aa12.73□□□□□ -0.37
GTF3A-205ENST00000466776 A8MXQ7 604 aa12.73□□□□□ -0.37
GTF3A-205ENST00000466776 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.73□□□□□ -0.37
GTF3A-205ENST00000466776 RTN3O95197 1032 aaPredicted RBP12.73□□□□□ -0.37
GTF3A-205ENST00000466776 CAVIN2O95810 425 aa12.73□□□□□ -0.37
GTF3A-205ENST00000466776 ADH1CP00326 375 aa12.73□□□□□ -0.37
GTF3A-205ENST00000466776 APODP05090 189 aa12.73□□□□□ -0.37
GTF3A-205ENST00000466776 TRIM21P19474 475 aaKnown RBP12.73□□□□□ -0.37
GTF3A-205ENST00000466776 ATICP31939 592 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms