RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 UNC93AQ86WB7 457 aa16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 ARL14EPQ8N8R7 260 aaPredicted RBP16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 LMAN1LQ9HAT1 526 aa16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 APOBEC3GQ9HC16 384 aaKnown RBP16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 TMEM8AQ9HCN3 771 aa16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 EHD2Q9NZN4 543 aa16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 GCNT4Q9P109 453 aa16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 CIZ1Q9ULV3 898 aaPredicted RBP16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 TRAV19A0A0A6YYK7 116 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 SPECC1L-ADORA2AF8WAN1 911 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 GADD45BO75293 160 aaPredicted RBP16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 CKMP06732 381 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 USP17L7P0C7H9 530 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 CHRNB1P11230 501 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 GTF2H1P32780 548 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 CTHP32929 405 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 NDST1P52848 882 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 PMS1P54277 932 aaKnown RBP16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 KRT39Q6A163 491 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 ANKRD40Q6AI12 368 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 TXNDC11Q6PKC3 985 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 ASCL5Q7RTU5 278 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 FAM35AQ86V20 835 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 RALGPS2Q86X27 583 aaPredicted RBP16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 ADSSL1Q8N142 457 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 CRYBG2Q8N1P7 616 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 KCNK16Q96T55 309 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 MED10Q9BTT4 135 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 GTPBP4Q9BZE4 634 aaKnown RBP16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 IMPG2Q9BZV3 1241 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 CHRDQ9H2X0 955 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 TRPM5Q9NZQ8 1165 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 HMGXB4Q9UGU5 601 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 TICRRQ7Z2Z1 1910 aa16.89■□□□□ 0.29
CRAMP1-204ENST00000466562 VPS13AQ96RL7 3174 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 ZNF840PA6NDX5 716 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 EPB41P11171 864 aaKnown RBP16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 HDCP19113 662 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 PPP3CCP48454 512 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 FKBP3Q00688 224 aaKnown RBP16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 TAF10Q12962 218 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 MTAPQ13126 283 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 ORC1Q13415 861 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 ITPRIPL2Q3MIP1 535 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 TRIM68Q6AZZ1 485 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 ISM2Q6H9L7 571 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 CC2D1AQ6P1N0 951 aaPredicted RBP16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 ZC3H3Q8IXZ2 948 aaKnown RBP16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 FUKQ8N0W3 1084 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 NUP93Q8N1F7 819 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 NKD2Q969F2 451 aaPredicted RBP16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 TSG101Q99816 390 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 EBF3Q9H4W6 596 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 HPS4Q9NQG7 708 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 FBXO4Q9UKT5 387 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 R4GN57 208 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 ATP8B3O60423 1300 aa16.88■□□□□ 0.29
CRAMP1-204ENST00000466562 F5P12259 2224 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 TRIM49BA6NDI0 452 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 PRR23AA6NEV1 266 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 OTOL1A6NHN0 477 aaPredicted RBP16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 KINO60870 393 aaKnown RBP16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 PFKLP17858 780 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 INCA1Q0VD86 236 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 RUNX3Q13761 415 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 MTF1Q14872 753 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 ZNF77Q15935 545 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 ZNF528Q3MIS6 628 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 WDR44Q5JSH3 913 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 C12orf29Q8N999 325 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 SEMA4DQ92854 862 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 SMARCD1Q96GM5 515 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 TWNKQ96RR1 684 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 NIF3L1Q9GZT8 377 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 CYP3A43Q9HB55 503 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 MAN1B1Q9UKM7 699 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 ARHGAP26Q9UNA1 814 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 MIA3Q5JRA6 1907 aa16.87■□□□□ 0.29
CRAMP1-204ENST00000466562 ZFHX2Q9C0A1 2572 aaPredicted RBP16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 PTPRDP23468 1912 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 TNFRSF10BO14763 440 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 SLC16A3O15427 465 aaKnown RBP16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 STX10O60499 249 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 AP1G2O75843 785 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 CCDC130P13994 396 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 ARSAP15289 507 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 TCF3P15923 654 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 YWHAQP27348 245 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 MXI1P50539 228 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 PDE6CP51160 858 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 ZXDBP98169 803 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 CSTF1Q05048 431 aaKnown RBP16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 LRRC63Q05C16 580 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 IFRD2Q12894 506 aaPredicted RBP16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 USP4Q13107 963 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 PON2Q15165 354 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 PDGFRLQ15198 375 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 MAMSTRQ6ZN01 415 aa16.86■□□□□ 0.29
CRAMP1-204ENST00000466562 CCDC150Q8NCX0 1101 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms