RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 HOXD10P28358 340 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 CETN2P41208 172 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 CALCOCO2Q13137 446 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 SMTNL2Q2TAL5 461 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 AGMOQ6ZNB7 445 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 RNF180Q86T96 592 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 OSTM1Q86WC4 334 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 ADGRF2Q8IZF7 708 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 ATL2Q8NHH9 583 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 GRK7Q8WTQ7 553 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 TSPYL2Q9H2G4 693 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-205ENST00000466192 ZWILCHQ9H900 591 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 LRRD1A4D1F6 860 aa19.18■□□□□ 0.66
COL9A3-205ENST00000466192 ACLYP53396 1101 aa19.18■□□□□ 0.66
COL9A3-205ENST00000466192 COPS2P61201 443 aa19.18■□□□□ 0.66
COL9A3-205ENST00000466192 CCNG2Q16589 344 aa19.18■□□□□ 0.66
COL9A3-205ENST00000466192 KCNT1Q5JUK3 1230 aa19.18■□□□□ 0.66
COL9A3-205ENST00000466192 TMEM110Q86TL2 294 aa19.18■□□□□ 0.66
COL9A3-205ENST00000466192 HACE1Q8IYU2 909 aa19.18■□□□□ 0.66
COL9A3-205ENST00000466192 TOP6BLQ8N6T0 577 aa19.18■□□□□ 0.66
COL9A3-205ENST00000466192 MIS12Q9H081 205 aa19.18■□□□□ 0.66
COL9A3-205ENST00000466192 HOMER3Q9NSC5 361 aa19.18■□□□□ 0.66
COL9A3-205ENST00000466192 FEZ2Q9UHY8 353 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-205ENST00000466192 FRMPD3Q5JV73 1810 aa19.18■□□□□ 0.66
COL9A3-205ENST00000466192 hCG_1818297A0A087WSY0 165 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 ARL5CA6NH57 179 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 C3orf70A6NLC5 250 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-205ENST00000466192 C2CD4BA6NLJ0 364 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 GRAP2O75791 330 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 GAS8O95995 478 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 ADORA2BP29275 332 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 ACTN2P35609 894 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 CDKN2BP42772 138 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 ZNF143P52747 638 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-205ENST00000466192 LPIN1Q14693 890 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 TRIM71Q2Q1W2 868 aaKnown RBP19.17■□□□□ 0.66
COL9A3-205ENST00000466192 OLFML1Q6UWY5 402 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 LEKR1Q6ZMV7 388 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 RAET1EQ8TD07 263 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 EPB41L4BQ9H329 900 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 PABPC3Q9H361 631 aaKnown RBP19.17■□□□□ 0.66
COL9A3-205ENST00000466192 SLC38A7Q9NVC3 462 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 HMGB1P1B2RPK0 211 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-205ENST00000466192 THP07101 528 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 GPD1P21695 349 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 WARSP23381 471 aaKnown RBP19.17■□□□□ 0.66
COL9A3-205ENST00000466192 MIPP30301 263 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 PTPN7P35236 360 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 VPS41P49754 854 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 ATP1A2P50993 1020 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 IFFO1Q0D2I5 559 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 PTK7Q13308 1070 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 TAF5Q15542 800 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 HADHQ16836 314 aaKnown RBP19.17■□□□□ 0.66
COL9A3-205ENST00000466192 SKIDA1Q1XH10 827 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 TFDP3Q5H9I0 405 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 SH3PXD2AQ5TCZ1 1133 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 TTC19Q6DKK2 380 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-205ENST00000466192 MRPL10Q7Z7H8 261 aaKnown RBP19.17■□□□□ 0.66
COL9A3-205ENST00000466192 SCUBE3Q8IX30 993 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 ANKRD52Q8NB46 1076 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 RXFP2Q8WXD0 754 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 LRRC4CQ9HCJ2 640 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 BCCIPQ9P287 314 aaKnown RBP eCLIP19.17■□□□□ 0.66
COL9A3-205ENST00000466192 PCSK1NQ9UHG2 260 aa19.17■□□□□ 0.66
COL9A3-205ENST00000466192 CYB561D2O14569 222 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 TP73O15350 636 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 PAPSS1O43252 624 aaPredicted RBP19.16■□□□□ 0.66
COL9A3-205ENST00000466192 TJP3O95049 919 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 KRT7P08729 469 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 PTK6Q13882 451 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 ACAP1Q15027 740 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 RAB6CQ53S08 254 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 SPDYCQ5MJ68 293 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 CCDC25Q86WR0 208 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 STK32AQ8WU08 396 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 KHSRPQ92945 711 aaKnown RBP eCLIP19.16■□□□□ 0.66
COL9A3-205ENST00000466192 CAPS2Q9BXY5 557 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 B3GNT5Q9BYG0 378 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 RAB6CQ9H0N0 254 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 SEMA4AQ9H3S1 761 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 NOD1Q9Y239 953 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 GIT1Q9Y2X7 761 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 ATP2C2O75185 946 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 RNF8O76064 485 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 SHBGP04278 402 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 PDGFRAP16234 1089 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 NR1D1P20393 614 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 SCNN1GP51170 649 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 CLCNKBP51801 687 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 BST2Q10589 180 aaKnown RBP19.16■□□□□ 0.66
COL9A3-205ENST00000466192 DSC3Q14574 896 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 CCDC142Q17RM4 750 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 WSCD1Q658N2 575 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 SYDE1Q6ZW31 735 aaPredicted RBP19.16■□□□□ 0.66
COL9A3-205ENST00000466192 SLC2A14Q8TDB8 520 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 SNF8Q96H20 258 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 CNPY3Q9BT09 278 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 ASNSD1Q9NWL6 643 aa19.16■□□□□ 0.66
COL9A3-205ENST00000466192 WHRNQ9P202 907 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms