RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 DNAI2Q9GZS0 605 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 MFSD1Q9H3U5 465 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 THAP9Q9H5L6 903 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 EHD2Q9NZN4 543 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 GCNT4Q9P109 453 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 MUC6Q6W4X9 2439 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 KRBA1A5PL33 1030 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 HEPACAM2A8MVW5 462 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 FAM200BP0CF97 657 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 PSMC3P17980 439 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 ERCC5P28715 1186 aaPredicted RBP13.68□□□□□ -0.22
COL5A1-206ENST00000465877 SLC5A3P53794 718 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 YWHAEP62258 255 aaKnown RBP13.68□□□□□ -0.22
COL5A1-206ENST00000465877 GPC5P78333 572 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 PFKPQ01813 784 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 TXNDC8Q6A555 127 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 CLEC20AQ6ZU45 233 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 IRF2BP1Q8IU81 584 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 FAM114A1Q8IWE2 563 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 CMTM8Q8IZV2 173 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 PPM1KQ8N3J5 372 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 UBR7Q8N806 425 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 MAB21L3Q8N8X9 362 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 SLC4A11Q8NBS3 891 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 DNASE1L2Q92874 299 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 E2F7Q96AV8 911 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 CYFIP2Q96F07 1278 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 KCNK16Q96T55 309 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 TRPC7Q9HCX4 862 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 WNT16Q9UBV4 365 aa13.68□□□□□ -0.22
COL5A1-206ENST00000465877 RTN3O95197 1032 aaPredicted RBP13.67□□□□□ -0.22
COL5A1-206ENST00000465877 CKMP06732 381 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 WEE1P30291 646 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 GDI1P31150 447 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 AVPR1AP37288 418 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 MTIF2P46199 727 aaKnown RBP13.67□□□□□ -0.22
COL5A1-206ENST00000465877 RAD23BP54727 409 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 VCPP55072 806 aaKnown RBP13.67□□□□□ -0.22
COL5A1-206ENST00000465877 MAP3K7CLP57077 242 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 FCHO2Q0JRZ9 810 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 PPP1R26Q5T8A7 1209 aaPredicted RBP13.67□□□□□ -0.22
COL5A1-206ENST00000465877 MON1AQ86VX9 555 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 CREBRFQ8IUR6 639 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 ARHGEF19Q8IW93 802 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 MFSD6LQ8IWD5 586 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 NUP93Q8N1F7 819 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 ZMIZ2Q8NF64 920 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 LMO3Q8TAP4 145 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 SLITRK1Q96PX8 696 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 HNRNPABQ99729 332 aaKnown RBP13.67□□□□□ -0.22
COL5A1-206ENST00000465877 SMOQ99835 787 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 TRMT61BQ9BVS5 477 aaKnown RBP13.67□□□□□ -0.22
COL5A1-206ENST00000465877 SLC46A2Q9BY10 475 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 INTS2Q9H0H0 1204 aaKnown RBP13.67□□□□□ -0.22
COL5A1-206ENST00000465877 SMG9Q9H0W8 520 aaKnown RBP13.67□□□□□ -0.22
COL5A1-206ENST00000465877 BRD9Q9H8M2 597 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 KIF9Q9HAQ2 790 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 CSNK1G1Q9HCP0 422 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 OBP2AQ9NY56 170 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 HCN4Q9Y3Q4 1203 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 DMDP11532 3685 aa13.67□□□□□ -0.22
COL5A1-206ENST00000465877 TRAV19A0A0A6YYK7 116 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 C2orf78A6NCI8 922 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 SOBPA7XYQ1 873 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 DPYSL4O14531 572 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 TNFRSF10BO14763 440 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 BEST1O76090 585 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 NPR3P17342 541 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 COL9A1P20849 921 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 GCNT1Q02742 428 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 MLF2Q15773 248 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-206ENST00000465877 STX1AQ16623 288 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 MAN2A1Q16706 1144 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 HSP90AA4PQ58FG1 418 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 CT47A1Q5JQC4 288 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-206ENST00000465877 IER5LQ5T953 404 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 GPRIN1Q7Z2K8 1008 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 GPIHBP1Q8IV16 184 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 YAF2Q8IY57 180 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 FLCNQ8NFG4 579 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 KAT5Q92993 513 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 JAKMIP2Q96AA8 810 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 TMEM176AQ96HP8 235 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 TBC1D17Q9HA65 648 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 PNPLA8Q9NP80 782 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 TRPM5Q9NZQ8 1165 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 TMEM63CQ9P1W3 806 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 CCL26Q9Y258 94 aa13.66□□□□□ -0.22
COL5A1-206ENST00000465877 ARNTLO00327 626 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 RFX1P22670 979 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 YWHAQP27348 245 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 TAF10Q12962 218 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 USP4Q13107 963 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 ZNF268Q14587 947 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-206ENST00000465877 SASS6Q6UVJ0 657 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 C11orf57Q6ZUT1 292 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-206ENST00000465877 CELF5Q8N6W0 485 aaKnown RBP13.65□□□□□ -0.22
COL5A1-206ENST00000465877 EHBP1Q8NDI1 1231 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 PDZD8Q8NEN9 1154 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 SCAMP5Q8TAC9 235 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms